| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784856
Identifier: 91784856
GI number: 91784856
Start: 3855680
End: 3858088
Strand: Reverse
Name: 91784856
Synonym: Bxe_A0936
Alternate gene names: NA
Gene position: 3858088-3855680 (Counterclockwise)
Preceding gene: 91784857
Following gene: 91784855
Centisome position: 78.8
GC content: 66.42
Gene sequence:
>2409_bases ATGGAGATGCTGCAACAGCGGTCGCCGAAACAGGTGTGGAGCGTGCGCGCCGCGTGGCTGCTGCTCGCGCTCGTGGCGGC GCTGTATTGCGGCTGGCGTTTCGCCGGACCGTCGCCGCTGCAAACCAATCTGCTCGCGCTATTACCCGCGACCGAGGCCG ATCCGGTCGCCGAACAGGCCGTGGATACGCTGGCGAGCGCGCTTGGCGACCGCACGGTTTTTCTGGTCACCAGCAACGAC GACGCGCACGCGAAGGCGGCCGCGAAACAGCTGGGTGCGTCGCTGCAAAAGAGCGGCGCGTTCGGTTCGGTGACGGCGGA ATTGCCGCCGTTCGATCTGTCGCAAATCGCGGCGCTGTACATGCCGTACCGCTTCGGCCTGCTGGCGCCGGCGGACCGCA CGGCATTGGCCAATGGCGCGGCGGGCAGCACGTTGCGGGACACGCTCGCGCAGCGCATCTACAGCCCGTTGCGCGGCGGC CTCACCACGCCGCTCGCCGACGATCCGTTCGGCTGGCTCGAACACTGGCTCGGCGGCCTGCCGCTGGCCACCTCGAATCT CGAACTCGAAGACAACATGCTGGTTTCGCATCACGGCGCCGCCACCAGTGTGCTGATCGTCGCGACGCTGCCGGGTTCGG CGTACGAAACGAAAACGCAGCACGCCGTGCTCGCGGCGCTGGCCGAAAGCGAAAGCGCCTTGAAGCAGTCGTTCCCCGAT GTCTCTGTGGCGAGAACAGGCGCCGTGTTTTACGCGGAAGCGGCGCGCAGTGCATCGGAACATGAGGTGCATCTGATCGG CATTGCATCGCTGTGCGGTATCGCGCTGCTGATGATGTGGGTGTTCCGTTCGCCGCGTCTGCTATTGCTCGGCTTCGTAT CGACCGCGCTCGGCATAGTTTGCGCGCTCGCGGTGACGATGCTGATTTTCGGCAAGCTGCATCTGTTGACGCTCGTGTTC GGCGCCAGCCTGATCGGCGAGGCGGTCGACTATTCGATCCAGTACTTCGTGGTGTATCTCGGCGCGCAGCGCGACTGGGA CGCACGGCGCGGCGCGCGCGCCGTGCGTCCCGCGCTGAGCGTGGCGCTGGCGACGAGCCTGCTCGGCTACGCGATTCTCA CATGGGTGCCGTTTCCCGCGCTCAAGCAGATTGCCTGCTTCGCGATTGCAGGGATCACGACGGCGTTCGCCTCCGTGCTG TGGCTGCTGCCCGCGTTGCTCACGCGCGCGCCTGAACGCAGCCCGCAGCGCGTGTTTGCAGGCGCGGCGCGTGTGCTGGC GGTATGGCATCGCACGATCGGCGGCAAGCGGGCGTGGTTTGTCGCGGCGCTGCTGCTGTTGCTGGCGATTCCCGGCTGGC TGCGTTTGAGCAGCGACGACGACATCCATCTGCTGATCCAGCGCGATGCCGTGCTCGTCGCGCAGGAAGACAAGGTGCGC GCGGCGGTCGGCGTGGATAACAGCGCGCAGTTTTTCGTGGTGCGCGGCGAGACGCCGGAACGCGTGCTGCAACGCGCCGA AGCGTTGGGGACGAAGCTGGATGCATTGAACGGAACAGCGAACAAGGTCGGCAGTTATCAGTCGGTTGCGCAATTCGTGC CGTCGGCGAAACAGCAGAATGAGGACCGCGCGTTGCTCGCGCAGCACGTGTTCGGCGACCGTGCCGCGTTGCGCGCCACG CTCCTGCAAGCCGGCTTCAAGGACGAAGTCGCCGACGCCTGGCTCGCCGCGTACGCGAAACCGCAAGCACCGCTGACGGT CGATACGTGGCTCGCGGCGCCGTGGTCGCAACCGTACAAACACCTTTGGCTCGGCGAAGTCGATGCATCCACGAAGGCCT ATGCCGCGGTCGTCATTCCGCAAGGCGTGACGCCGCGGAACGAACCCGCGTTGATCGCGTTGGCGCAAGGCTTGCCCGGC GTCGTGTTCGTCGACAAGGCCGCCAGCGTGTCGAAACTGTTCGGCGCATATCGCGTGGATAGCGGCTGGTGGCTCGGCGG CGCGCTGGCCACCGTGCTCGTTCTGCTGATGCTGCGTTACCGCGTGCGCGGCGGCATCGCCGTGGCTTTGCCGGTGCTGC TTGCCGTGGGCGTCACGCTCGCCGTATTCGGCTACGTTCACGTGCCGCTCAATCTGTTCAACTGGCTCGCGCTGATGCTC GTGCTCGGCGTAGGCGCAAACTATGCCGTATTCCTGCGTGAAGGCTGCCTGCGCGCGGACGCCGACCTCGGCGCGGTGTG GACCGGCGTGTTGTTGTCGGCGGCCACCACGCTGTTGTCGTTCGGCATGCTCGGCATGAGCGCCATGCCCGCGCTGAAAA GTTTTGGCGCGACGCTCGCGCTCGGCATCGCGGTCTCGGTGCTGCTCGCGCCGATCGGCATGCCATCGGAATCAAGGAGG GCCGCATGA
Upstream 100 bases:
>100_bases TCACGTTAGCAAATGGCGACGTCACCCAACTCGACTTCACGAAGAGCGCGGCCGTGACCGAACTCAGCGCGGCTGAGCGC GGCCTGCTCGGGGCGCCGTA
Downstream 100 bases:
>100_bases AGGCGCCATCAGTTTATTTGCACGCGCTCGGCATGATCAACGCGCTCGGCGGCGACCTCGACAGCATTGTCCCGGCGCTT GCCGCCGGCCGTTCGCCGGG
Product: RND superfamily drug exporter
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MEMLQQRSPKQVWSVRAAWLLLALVAALYCGWRFAGPSPLQTNLLALLPATEADPVAEQAVDTLASALGDRTVFLVTSND DAHAKAAAKQLGASLQKSGAFGSVTAELPPFDLSQIAALYMPYRFGLLAPADRTALANGAAGSTLRDTLAQRIYSPLRGG LTTPLADDPFGWLEHWLGGLPLATSNLELEDNMLVSHHGAATSVLIVATLPGSAYETKTQHAVLAALAESESALKQSFPD VSVARTGAVFYAEAARSASEHEVHLIGIASLCGIALLMMWVFRSPRLLLLGFVSTALGIVCALAVTMLIFGKLHLLTLVF GASLIGEAVDYSIQYFVVYLGAQRDWDARRGARAVRPALSVALATSLLGYAILTWVPFPALKQIACFAIAGITTAFASVL WLLPALLTRAPERSPQRVFAGAARVLAVWHRTIGGKRAWFVAALLLLLAIPGWLRLSSDDDIHLLIQRDAVLVAQEDKVR AAVGVDNSAQFFVVRGETPERVLQRAEALGTKLDALNGTANKVGSYQSVAQFVPSAKQQNEDRALLAQHVFGDRAALRAT LLQAGFKDEVADAWLAAYAKPQAPLTVDTWLAAPWSQPYKHLWLGEVDASTKAYAAVVIPQGVTPRNEPALIALAQGLPG VVFVDKAASVSKLFGAYRVDSGWWLGGALATVLVLLMLRYRVRGGIAVALPVLLAVGVTLAVFGYVHVPLNLFNWLALML VLGVGANYAVFLREGCLRADADLGAVWTGVLLSAATTLLSFGMLGMSAMPALKSFGATLALGIAVSVLLAPIGMPSESRR AA
Sequences:
>Translated_802_residues MEMLQQRSPKQVWSVRAAWLLLALVAALYCGWRFAGPSPLQTNLLALLPATEADPVAEQAVDTLASALGDRTVFLVTSND DAHAKAAAKQLGASLQKSGAFGSVTAELPPFDLSQIAALYMPYRFGLLAPADRTALANGAAGSTLRDTLAQRIYSPLRGG LTTPLADDPFGWLEHWLGGLPLATSNLELEDNMLVSHHGAATSVLIVATLPGSAYETKTQHAVLAALAESESALKQSFPD VSVARTGAVFYAEAARSASEHEVHLIGIASLCGIALLMMWVFRSPRLLLLGFVSTALGIVCALAVTMLIFGKLHLLTLVF GASLIGEAVDYSIQYFVVYLGAQRDWDARRGARAVRPALSVALATSLLGYAILTWVPFPALKQIACFAIAGITTAFASVL WLLPALLTRAPERSPQRVFAGAARVLAVWHRTIGGKRAWFVAALLLLLAIPGWLRLSSDDDIHLLIQRDAVLVAQEDKVR AAVGVDNSAQFFVVRGETPERVLQRAEALGTKLDALNGTANKVGSYQSVAQFVPSAKQQNEDRALLAQHVFGDRAALRAT LLQAGFKDEVADAWLAAYAKPQAPLTVDTWLAAPWSQPYKHLWLGEVDASTKAYAAVVIPQGVTPRNEPALIALAQGLPG VVFVDKAASVSKLFGAYRVDSGWWLGGALATVLVLLMLRYRVRGGIAVALPVLLAVGVTLAVFGYVHVPLNLFNWLALML VLGVGANYAVFLREGCLRADADLGAVWTGVLLSAATTLLSFGMLGMSAMPALKSFGATLALGIAVSVLLAPIGMPSESRR AA >Mature_802_residues MEMLQQRSPKQVWSVRAAWLLLALVAALYCGWRFAGPSPLQTNLLALLPATEADPVAEQAVDTLASALGDRTVFLVTSND DAHAKAAAKQLGASLQKSGAFGSVTAELPPFDLSQIAALYMPYRFGLLAPADRTALANGAAGSTLRDTLAQRIYSPLRGG LTTPLADDPFGWLEHWLGGLPLATSNLELEDNMLVSHHGAATSVLIVATLPGSAYETKTQHAVLAALAESESALKQSFPD VSVARTGAVFYAEAARSASEHEVHLIGIASLCGIALLMMWVFRSPRLLLLGFVSTALGIVCALAVTMLIFGKLHLLTLVF GASLIGEAVDYSIQYFVVYLGAQRDWDARRGARAVRPALSVALATSLLGYAILTWVPFPALKQIACFAIAGITTAFASVL WLLPALLTRAPERSPQRVFAGAARVLAVWHRTIGGKRAWFVAALLLLLAIPGWLRLSSDDDIHLLIQRDAVLVAQEDKVR AAVGVDNSAQFFVVRGETPERVLQRAEALGTKLDALNGTANKVGSYQSVAQFVPSAKQQNEDRALLAQHVFGDRAALRAT LLQAGFKDEVADAWLAAYAKPQAPLTVDTWLAAPWSQPYKHLWLGEVDASTKAYAAVVIPQGVTPRNEPALIALAQGLPG VVFVDKAASVSKLFGAYRVDSGWWLGGALATVLVLLMLRYRVRGGIAVALPVLLAVGVTLAVFGYVHVPLNLFNWLALML VLGVGANYAVFLREGCLRADADLGAVWTGVLLSAATTLLSFGMLGMSAMPALKSFGATLALGIAVSVLLAPIGMPSESRR AA
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85208; Mature: 85208
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMLQQRSPKQVWSVRAAWLLLALVAALYCGWRFAGPSPLQTNLLALLPATEADPVAEQA CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCCCCCHHHHHH VDTLASALGDRTVFLVTSNDDAHAKAAAKQLGASLQKSGAFGSVTAELPPFDLSQIAALY HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH MPYRFGLLAPADRTALANGAAGSTLRDTLAQRIYSPLRGGLTTPLADDPFGWLEHWLGGL HHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC PLATSNLELEDNMLVSHHGAATSVLIVATLPGSAYETKTQHAVLAALAESESALKQSFPD CEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VSVARTGAVFYAEAARSASEHEVHLIGIASLCGIALLMMWVFRSPRLLLLGFVSTALGIV CHHHHCCHHEEHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH CALAVTMLIFGKLHLLTLVFGASLIGEAVDYSIQYFVVYLGAQRDWDARRGARAVRPALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHCHHHHHHHHH VALATSLLGYAILTWVPFPALKQIACFAIAGITTAFASVLWLLPALLTRAPERSPQRVFA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GAARVLAVWHRTIGGKRAWFVAALLLLLAIPGWLRLSSDDDIHLLIQRDAVLVAQEDKVR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEEEEECCCCCE AAVGVDNSAQFFVVRGETPERVLQRAEALGTKLDALNGTANKVGSYQSVAQFVPSAKQQN EEECCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHCCCCHHHCCCHHHHHHHCCCHHCCC EDRALLAQHVFGDRAALRATLLQAGFKDEVADAWLAAYAKPQAPLTVDTWLAAPWSQPYK CHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCHH HLWLGEVDASTKAYAAVVIPQGVTPRNEPALIALAQGLPGVVFVDKAASVSKLFGAYRVD HHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHCCC SGWWLGGALATVLVLLMLRYRVRGGIAVALPVLLAVGVTLAVFGYVHVPLNLFNWLALML CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGVGANYAVFLREGCLRADADLGAVWTGVLLSAATTLLSFGMLGMSAMPALKSFGATLA HHHCCCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIAVSVLLAPIGMPSESRRAA HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MEMLQQRSPKQVWSVRAAWLLLALVAALYCGWRFAGPSPLQTNLLALLPATEADPVAEQA CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCCCCCHHHHHH VDTLASALGDRTVFLVTSNDDAHAKAAAKQLGASLQKSGAFGSVTAELPPFDLSQIAALY HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH MPYRFGLLAPADRTALANGAAGSTLRDTLAQRIYSPLRGGLTTPLADDPFGWLEHWLGGL HHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC PLATSNLELEDNMLVSHHGAATSVLIVATLPGSAYETKTQHAVLAALAESESALKQSFPD CEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VSVARTGAVFYAEAARSASEHEVHLIGIASLCGIALLMMWVFRSPRLLLLGFVSTALGIV CHHHHCCHHEEHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH CALAVTMLIFGKLHLLTLVFGASLIGEAVDYSIQYFVVYLGAQRDWDARRGARAVRPALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHCHHHHHHHHH VALATSLLGYAILTWVPFPALKQIACFAIAGITTAFASVLWLLPALLTRAPERSPQRVFA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GAARVLAVWHRTIGGKRAWFVAALLLLLAIPGWLRLSSDDDIHLLIQRDAVLVAQEDKVR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEEEEECCCCCE AAVGVDNSAQFFVVRGETPERVLQRAEALGTKLDALNGTANKVGSYQSVAQFVPSAKQQN EEECCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHCCCCHHHCCCHHHHHHHCCCHHCCC EDRALLAQHVFGDRAALRATLLQAGFKDEVADAWLAAYAKPQAPLTVDTWLAAPWSQPYK CHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCHH HLWLGEVDASTKAYAAVVIPQGVTPRNEPALIALAQGLPGVVFVDKAASVSKLFGAYRVD HHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHCCC SGWWLGGALATVLVLLMLRYRVRGGIAVALPVLLAVGVTLAVFGYVHVPLNLFNWLALML CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGVGANYAVFLREGCLRADADLGAVWTGVLLSAATTLLSFGMLGMSAMPALKSFGATLA HHHCCCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIAVSVLLAPIGMPSESRRAA HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA