| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91784857
Identifier: 91784857
GI number: 91784857
Start: 3858088
End: 3858786
Strand: Reverse
Name: 91784857
Synonym: Bxe_A0935
Alternate gene names: NA
Gene position: 3858786-3858088 (Counterclockwise)
Preceding gene: 91784858
Following gene: 91784856
Centisome position: 78.82
GC content: 65.67
Gene sequence:
>699_bases ATGGGGACGGTGAATTTGCGCGCGGTGATCGTGGGTACATTGAGCACGCTGAGTGTGGCGAGTGTGCTAGCCGCGACAGT CGTATGGACGCAGGCCGCATCGGCCGCGCCGTCGGTATCGGCGAAAGAAGCCGCGCCCGGCAACCCCGCACTCGTCTCGC AGATCGCCGCGCATCTCGCGCAGGCGCGGGGCGTGCGCGCCCAATTCACGCAGACGCAAACGCTGGCAGCGATGAAGCAG CCGCTCGTCAGCACCGGCTCGCTGTTGTTCTTCCGCGAGCGCGGTGTGATCTGGCAGATCGACAAGCCATACAAGACCAC CTATGTAATCACCGACGCCGGCGTGGTGGAAGTCGATGCCAACGGCCAGCGCGTCGCGGCGCACAGCGCCCAGGGTACGC GCGGCGTCGCGCAAGTCTCGAAGATGATGCGCGCGATGCTCGGCGGCGATCTGTCGGCGCTGTACTCGCAATTCGACGTG GAAGCCCAGGGTAACGCCGCGCAATGGCGCATGCAGCTCACGCCGAACCAGCCGCAGATCGCGCAGTCGATCAAAGGTCT GGCAATGAGCGGCGGCGACTATCTGCAGAGCCTGCGCATCACGTTAGCAAATGGCGACGTCACCCAACTCGACTTCACGA AGAGCGCGGCCGTGACCGAACTCAGCGCGGCTGAGCGCGGCCTGCTCGGGGCGCCGTAA
Upstream 100 bases:
>100_bases GCCTGACCAAGGGCTATACGATCCAGGTCGCGGTCGATGCCGCTACCCAGGAGTTGCAGTTCGTCTCACCGCCGGTCGTG TTCGACAAGCTGGAGCGCGT
Downstream 100 bases:
>100_bases TGGAGATGCTGCAACAGCGGTCGCCGAAACAGGTGTGGAGCGTGCGCGCCGCGTGGCTGCTGCTCGCGCTCGTGGCGGCG CTGTATTGCGGCTGGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipoprotein Carrier Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MGTVNLRAVIVGTLSTLSVASVLAATVVWTQAASAAPSVSAKEAAPGNPALVSQIAAHLAQARGVRAQFTQTQTLAAMKQ PLVSTGSLLFFRERGVIWQIDKPYKTTYVITDAGVVEVDANGQRVAAHSAQGTRGVAQVSKMMRAMLGGDLSALYSQFDV EAQGNAAQWRMQLTPNQPQIAQSIKGLAMSGGDYLQSLRITLANGDVTQLDFTKSAAVTELSAAERGLLGAP
Sequences:
>Translated_232_residues MGTVNLRAVIVGTLSTLSVASVLAATVVWTQAASAAPSVSAKEAAPGNPALVSQIAAHLAQARGVRAQFTQTQTLAAMKQ PLVSTGSLLFFRERGVIWQIDKPYKTTYVITDAGVVEVDANGQRVAAHSAQGTRGVAQVSKMMRAMLGGDLSALYSQFDV EAQGNAAQWRMQLTPNQPQIAQSIKGLAMSGGDYLQSLRITLANGDVTQLDFTKSAAVTELSAAERGLLGAP >Mature_231_residues GTVNLRAVIVGTLSTLSVASVLAATVVWTQAASAAPSVSAKEAAPGNPALVSQIAAHLAQARGVRAQFTQTQTLAAMKQP LVSTGSLLFFRERGVIWQIDKPYKTTYVITDAGVVEVDANGQRVAAHSAQGTRGVAQVSKMMRAMLGGDLSALYSQFDVE AQGNAAQWRMQLTPNQPQIAQSIKGLAMSGGDYLQSLRITLANGDVTQLDFTKSAAVTELSAAERGLLGAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24241; Mature: 24110
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVNLRAVIVGTLSTLSVASVLAATVVWTQAASAAPSVSAKEAAPGNPALVSQIAAHLA CCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH QARGVRAQFTQTQTLAAMKQPLVSTGSLLFFRERGVIWQIDKPYKTTYVITDAGVVEVDA HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCEEEEEEECCCEEEECC NGQRVAAHSAQGTRGVAQVSKMMRAMLGGDLSALYSQFDVEAQGNAAQWRMQLTPNQPQI CCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEECCCCHHH AQSIKGLAMSGGDYLQSLRITLANGDVTQLDFTKSAAVTELSAAERGLLGAP HHHHHHHHCCCHHHHHEEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GTVNLRAVIVGTLSTLSVASVLAATVVWTQAASAAPSVSAKEAAPGNPALVSQIAAHLA CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH QARGVRAQFTQTQTLAAMKQPLVSTGSLLFFRERGVIWQIDKPYKTTYVITDAGVVEVDA HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCEEEEEEECCCEEEECC NGQRVAAHSAQGTRGVAQVSKMMRAMLGGDLSALYSQFDVEAQGNAAQWRMQLTPNQPQI CCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEECCCCHHH AQSIKGLAMSGGDYLQSLRITLANGDVTQLDFTKSAAVTELSAAERGLLGAP HHHHHHHHCCCHHHHHEEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA