| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is tilS [H]
Identifier: 91784172
GI number: 91784172
Start: 3110547
End: 3111977
Strand: Reverse
Name: tilS [H]
Synonym: Bxe_A1629
Alternate gene names: 91784172
Gene position: 3111977-3110547 (Counterclockwise)
Preceding gene: 91784173
Following gene: 91784171
Centisome position: 63.56
GC content: 69.18
Gene sequence:
>1431_bases GTGACTTCCACCGCCGAAACCTCTGCCGACCGCCTCGTTCTCGAGGCGGTCGGCTTTTCGTTGTCCAGGCTTCCTGCAAA CGCCCGTATTGCGATTGCGTTTAGCGGCGGCGTGGATTCGAGCGTGCTGCTCGATGCCGCGGTGCGTGTCGCGGGCGCGT CGCGCTGCGTCGCGCTGCATGTGCATCACGGCCTGAGCGCGCATGCGGATGCGTGGCTTGCGCATTGCGAGGCGTTCGCG CGGGAGCGTGGCGTCGAGTTCGCTGCGGAGCGCGTCGCGGTGTCGCGTGACACGGGTGTGGGCGTCGAGGCGGCCGCGCG CGATGCGCGTTATCGCGCGCTCGACGACATGTGCGCGTCGCGCGGTGTCGCCACGCTCTGGCTCGCGCAACATGCGGACG ATCAGGCGGAAACCGTGCTGCTGCAATTGCTGCGGGGCGCCGGCCTCGCGGGTCTGGCCGCGATGGCGCCGAAGTATTTG CCGGCGAAGGCGTCGGCAACGCGCGTGCGGCCTTTGCTCCATCTGCTGCGTGCGCAACTCGAGCAATACGCGAGCGCGCG TGCGCTGCGCTGGATCGACGACGAGTCGAACGCGGATACGCGCTATGCGCGCAACGCGTTGCGCCACGACGTGATGCCGG CGCTCGCTGTCCACTTTCCCGGCTTTCGCGACGCGCTGGCTCGCACGGCGGCACACGCGGCGTCCGCGCAGCGCTTGCTC GACGAATTCGCGCGCATCGACATGGAAGCCGCATCACGCGACGAAGGACGCGCGCTCTCGCACGACGCCTTGCTCGCGCT CGACGACGAGCGCGCGCTCAACCTCATGCGCTACTGGATGCGCACGCTGGGCCTCGCCGCCGCGTCGAGCGCGCGTCTTG GCGATGCGCTGCGGCAACTGCGCGAAATCGGCGCGGCGGGCGAAGGTCATGCGCTGCGTGTCGATCACGCGGGTCATGCA TTGCGCAGCTATCGCGGCCTCGTGTATTGGGAAGCCGGAGACAGCAGCGGGCCCGCCGACGAAACCGCGCTCGCCGCGCG CGCGGTCAGCGAGCTGGCATGGCAGGGCGAGTCGGTCTGGCGCTTGCCGCAATGGCGCGGCACTTTCATATTCGCCGACG CAAGCGCGGGCGAGCCCGACGCGATTCCCGTCAGCGTTCTGCGGCGCGCCGTGTCGAGCGCACGCTCGCGCAGCGGCGGC GAACGGATGCGCATGGGCGACGCGCACAATGCGCCGGGCCGCACGCTGAAAAACCTGTTCCAGGAACGCGGTATTCCCGC GTGGAAACGCGACGTGCCGCTGCTCTACATCGGCGAGGAACTGCTGTTCGTGCCGCTGCTCGGGGTGAATCGCGCGGCGT TGCCGGACCAGCCCGGCGAGGCTGGATCACACGTCAGGATCGTGTGGCGTGAAGATCTGCTGATCGCCTGA
Upstream 100 bases:
>100_bases CGAACGGTTGATGTCGTACGGCAAGTTCAAGGAAACGACGCCGGGTGCCTAAGCCCGCGCGCGTTTTCTTTCGTCCTTCA GCGCCCAGCGCGCGAGCGAC
Downstream 100 bases:
>100_bases CCGGCCGGTCGGACACCCGGATGCGCGAACCGGTGAATCCGGGAAACGTGGCGCAAATCCGCGTGAAACAAGCCTTTGCG GCCCTTATTGAACGCATTTC
Product: PP family ATPase
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MTSTAETSADRLVLEAVGFSLSRLPANARIAIAFSGGVDSSVLLDAAVRVAGASRCVALHVHHGLSAHADAWLAHCEAFA RERGVEFAAERVAVSRDTGVGVEAAARDARYRALDDMCASRGVATLWLAQHADDQAETVLLQLLRGAGLAGLAAMAPKYL PAKASATRVRPLLHLLRAQLEQYASARALRWIDDESNADTRYARNALRHDVMPALAVHFPGFRDALARTAAHAASAQRLL DEFARIDMEAASRDEGRALSHDALLALDDERALNLMRYWMRTLGLAAASSARLGDALRQLREIGAAGEGHALRVDHAGHA LRSYRGLVYWEAGDSSGPADETALAARAVSELAWQGESVWRLPQWRGTFIFADASAGEPDAIPVSVLRRAVSSARSRSGG ERMRMGDAHNAPGRTLKNLFQERGIPAWKRDVPLLYIGEELLFVPLLGVNRAALPDQPGEAGSHVRIVWREDLLIA
Sequences:
>Translated_476_residues MTSTAETSADRLVLEAVGFSLSRLPANARIAIAFSGGVDSSVLLDAAVRVAGASRCVALHVHHGLSAHADAWLAHCEAFA RERGVEFAAERVAVSRDTGVGVEAAARDARYRALDDMCASRGVATLWLAQHADDQAETVLLQLLRGAGLAGLAAMAPKYL PAKASATRVRPLLHLLRAQLEQYASARALRWIDDESNADTRYARNALRHDVMPALAVHFPGFRDALARTAAHAASAQRLL DEFARIDMEAASRDEGRALSHDALLALDDERALNLMRYWMRTLGLAAASSARLGDALRQLREIGAAGEGHALRVDHAGHA LRSYRGLVYWEAGDSSGPADETALAARAVSELAWQGESVWRLPQWRGTFIFADASAGEPDAIPVSVLRRAVSSARSRSGG ERMRMGDAHNAPGRTLKNLFQERGIPAWKRDVPLLYIGEELLFVPLLGVNRAALPDQPGEAGSHVRIVWREDLLIA >Mature_475_residues TSTAETSADRLVLEAVGFSLSRLPANARIAIAFSGGVDSSVLLDAAVRVAGASRCVALHVHHGLSAHADAWLAHCEAFAR ERGVEFAAERVAVSRDTGVGVEAAARDARYRALDDMCASRGVATLWLAQHADDQAETVLLQLLRGAGLAGLAAMAPKYLP AKASATRVRPLLHLLRAQLEQYASARALRWIDDESNADTRYARNALRHDVMPALAVHFPGFRDALARTAAHAASAQRLLD EFARIDMEAASRDEGRALSHDALLALDDERALNLMRYWMRTLGLAAASSARLGDALRQLREIGAAGEGHALRVDHAGHAL RSYRGLVYWEAGDSSGPADETALAARAVSELAWQGESVWRLPQWRGTFIFADASAGEPDAIPVSVLRRAVSSARSRSGGE RMRMGDAHNAPGRTLKNLFQERGIPAWKRDVPLLYIGEELLFVPLLGVNRAALPDQPGEAGSHVRIVWREDLLIA
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=461, Percent_Identity=36.0086767895879, Blast_Score=185, Evalue=5e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012796 - InterPro: IPR012795 - InterPro: IPR015262 - InterPro: IPR020825 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3; PF09179 DUF1946; PF11734 TilS_C [H]
EC number: NA
Molecular weight: Translated: 51385; Mature: 51254
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTAETSADRLVLEAVGFSLSRLPANARIAIAFSGGVDSSVLLDAAVRVAGASRCVALH CCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE VHHGLSAHADAWLAHCEAFARERGVEFAAERVAVSRDTGVGVEAAARDARYRALDDMCAS ECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RGVATLWLAQHADDQAETVLLQLLRGAGLAGLAAMAPKYLPAKASATRVRPLLHLLRAQL CCCCEEHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH EQYASARALRWIDDESNADTRYARNALRHDVMPALAVHFPGFRDALARTAAHAASAQRLL HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH DEFARIDMEAASRDEGRALSHDALLALDDERALNLMRYWMRTLGLAAASSARLGDALRQL HHHHHCCHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH REIGAAGEGHALRVDHAGHALRSYRGLVYWEAGDSSGPADETALAARAVSELAWQGESVW HHHCCCCCCCEEEECCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE RLPQWRGTFIFADASAGEPDAIPVSVLRRAVSSARSRSGGERMRMGDAHNAPGRTLKNLF ECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHH QERGIPAWKRDVPLLYIGEELLFVPLLGVNRAALPDQPGEAGSHVRIVWREDLLIA HHCCCCCHHHCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEECC >Mature Secondary Structure TSTAETSADRLVLEAVGFSLSRLPANARIAIAFSGGVDSSVLLDAAVRVAGASRCVALH CCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE VHHGLSAHADAWLAHCEAFARERGVEFAAERVAVSRDTGVGVEAAARDARYRALDDMCAS ECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RGVATLWLAQHADDQAETVLLQLLRGAGLAGLAAMAPKYLPAKASATRVRPLLHLLRAQL CCCCEEHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH EQYASARALRWIDDESNADTRYARNALRHDVMPALAVHFPGFRDALARTAAHAASAQRLL HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH DEFARIDMEAASRDEGRALSHDALLALDDERALNLMRYWMRTLGLAAASSARLGDALRQL HHHHHCCHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH REIGAAGEGHALRVDHAGHALRSYRGLVYWEAGDSSGPADETALAARAVSELAWQGESVW HHHCCCCCCCEEEECCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE RLPQWRGTFIFADASAGEPDAIPVSVLRRAVSSARSRSGGERMRMGDAHNAPGRTLKNLF ECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHH QERGIPAWKRDVPLLYIGEELLFVPLLGVNRAALPDQPGEAGSHVRIVWREDLLIA HHCCCCCHHHCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA