| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is lysC [H]
Identifier: 91784171
GI number: 91784171
Start: 3108921
End: 3110171
Strand: Reverse
Name: lysC [H]
Synonym: Bxe_A1630
Alternate gene names: 91784171
Gene position: 3110171-3108921 (Counterclockwise)
Preceding gene: 91784172
Following gene: 91784170
Centisome position: 63.53
GC content: 61.07
Gene sequence:
>1251_bases ATGGCACTCATCGTACACAAATACGGCGGCACCTCGATGGGCTCGGTCGAGCGCATCAAGAACGTCGCCAGGCGCGTCGC GAAATGGCACAAGGCTGGCCACAAGATGGTCGTCGTGCCGTCGGCGATGTCCGGCGAAACCAACCGTTTGCTCGGTCTCG CGAAAGAAATCACGGCTCAGCCGAGCCCGCGCGAACTCGACATGATCGCCGCTACGGGCGAGCAGGTCAGCTCCGGACTG CTCGCCATCGCGCTGCAGGAAGCCGGCGTCGACGCGGTCAGCTACGCCGGCTGGCAAGTGCCGGTCAAAACGGATAGCGC ATTCACGAAAGCGCGTATCAGCGAAATCGACGGCGAGCGCGTGCTGCGCGATCTCGACGCGGGCAAGGTGGTGGTGATCA CCGGCTTCCAGGGTATCGATCCTGACGGCAATATCACCACGCTCGGCCGTGGCGGCTCGGATACGTCGGCGGTCGCGGTC GCGGCTGCGCTGAAGGCCGATGAGTGCCTGATCTACACGGACGTCGACGGTGTGTACACGACCGACCCGCGCGTGGTGGA AGAAGCGCGCCGGCTCGATCGCGTGACGTTCGAAGAAATGCTGGAAATGGCAAGCCTGGGTTCGAAGGTGCTGCAGATCC GCTCGGTGGAATTCGCCGGCAAATATCAGGTGAAGACGCGTGTGCTGTCGAGCCTGACCGATCCGCTGATACCGCTCGAC GCTGAAATGAAGTCGGGCACCCTGATTACTTTTGAAGAAGACGAGACCATGGAAAAAGCAGTCATCTCGGGTATCGCGTT TCAGCGCGATGAAGCTCGTATCGCCGTGATGGGTGTGCCCGACAAGCCGGGCATCGCGTATCAGATTCTCGGCCCGGTGG CGGACGCGAATATCGACGTCGACATGATCATTCAGAACCAGAGCGTGGATGGTAAAACGGCGTTCACGTTCACGGTCGGC CGTGGCGACTATCAGCGCGCTATGGACATCCTCACGGGACAGGTGAAGGGCCACGTGCAGGCCGAGCAGGTGCTGGGCGA TCCGAAGGTGTCGAAGGTGTCGGTGGTCGGCGTCGGCATGCGCTCGCACGTCGGTATCGCGAGCACCATGTTCCGCACGC TGTCGGAAGAGGGCATCAACATCCAGATGATCTCGACCTCCGAAATCAAGATCTCGGTATTGATCGACGAGAAGTACATG GAGCTCGCCGTACGCGCGCTTCATAAAGCGTTCGAACTGGATCAGGCGTGA
Upstream 100 bases:
>100_bases CCACACATTTTGCCGTCGTTCACAAGACGTTGCGCTCCTGTGCTTTTGTGCGGTCGTCTCCAGCGCGCCAGCGCGGTTTC TCTTCCAGTTCAGAACGACA
Downstream 100 bases:
>100_bases GTAAAGTTGGGCAACGGAGTGGACAGGAGCGCTCCGTTTGTTTTGCGTGGTCGACGTGAATAAATTGCGTCATTGATGAC AAAACTGGCACAAAAAATGT
Product: aspartate kinase
Products: NA
Alternate protein names: Aspartate kinase [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MALIVHKYGGTSMGSVERIKNVARRVAKWHKAGHKMVVVPSAMSGETNRLLGLAKEITAQPSPRELDMIAATGEQVSSGL LAIALQEAGVDAVSYAGWQVPVKTDSAFTKARISEIDGERVLRDLDAGKVVVITGFQGIDPDGNITTLGRGGSDTSAVAV AAALKADECLIYTDVDGVYTTDPRVVEEARRLDRVTFEEMLEMASLGSKVLQIRSVEFAGKYQVKTRVLSSLTDPLIPLD AEMKSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDVDMIIQNQSVDGKTAFTFTVG RGDYQRAMDILTGQVKGHVQAEQVLGDPKVSKVSVVGVGMRSHVGIASTMFRTLSEEGINIQMISTSEIKISVLIDEKYM ELAVRALHKAFELDQA
Sequences:
>Translated_416_residues MALIVHKYGGTSMGSVERIKNVARRVAKWHKAGHKMVVVPSAMSGETNRLLGLAKEITAQPSPRELDMIAATGEQVSSGL LAIALQEAGVDAVSYAGWQVPVKTDSAFTKARISEIDGERVLRDLDAGKVVVITGFQGIDPDGNITTLGRGGSDTSAVAV AAALKADECLIYTDVDGVYTTDPRVVEEARRLDRVTFEEMLEMASLGSKVLQIRSVEFAGKYQVKTRVLSSLTDPLIPLD AEMKSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDVDMIIQNQSVDGKTAFTFTVG RGDYQRAMDILTGQVKGHVQAEQVLGDPKVSKVSVVGVGMRSHVGIASTMFRTLSEEGINIQMISTSEIKISVLIDEKYM ELAVRALHKAFELDQA >Mature_415_residues ALIVHKYGGTSMGSVERIKNVARRVAKWHKAGHKMVVVPSAMSGETNRLLGLAKEITAQPSPRELDMIAATGEQVSSGLL AIALQEAGVDAVSYAGWQVPVKTDSAFTKARISEIDGERVLRDLDAGKVVVITGFQGIDPDGNITTLGRGGSDTSAVAVA AALKADECLIYTDVDGVYTTDPRVVEEARRLDRVTFEEMLEMASLGSKVLQIRSVEFAGKYQVKTRVLSSLTDPLIPLDA EMKSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDVDMIIQNQSVDGKTAFTFTVGR GDYQRAMDILTGQVKGHVQAEQVLGDPKVSKVSVVGVGMRSHVGIASTMFRTLSEEGINIQMISTSEIKISVLIDEKYME LAVRALHKAFELDQA
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=301, Percent_Identity=32.890365448505, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1790455, Length=382, Percent_Identity=29.0575916230367, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790376, Length=280, Percent_Identity=26.0714285714286, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320893, Length=404, Percent_Identity=28.4653465346535, Blast_Score=119, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 44800; Mature: 44669
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIVHKYGGTSMGSVERIKNVARRVAKWHKAGHKMVVVPSAMSGETNRLLGLAKEITAQ CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCC PSPRELDMIAATGEQVSSGLLAIALQEAGVDAVSYAGWQVPVKTDSAFTKARISEIDGER CCCCCEEEEEECCHHHHCCEEEEEEECCCCCEEEECCEEEEECCCCHHHHHHHHHCCHHH VLRDLDAGKVVVITGFQGIDPDGNITTLGRGGSDTSAVAVAAALKADECLIYTDVDGVYT HHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCEEE TDPRVVEEARRLDRVTFEEMLEMASLGSKVLQIRSVEFAGKYQVKTRVLSSLTDPLIPLD CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCHHHHHHHHHHHCCCCCCCC AEMKSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDV CCCCCCEEEEECCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCE DMIIQNQSVDGKTAFTFTVGRGDYQRAMDILTGQVKGHVQAEQVLGDPKVSKVSVVGVGM EEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEHHHHCCCCCCCEEEEEEECH RSHVGIASTMFRTLSEEGINIQMISTSEIKISVLIDEKYMELAVRALHKAFELDQA HHCCHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALIVHKYGGTSMGSVERIKNVARRVAKWHKAGHKMVVVPSAMSGETNRLLGLAKEITAQ EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCC PSPRELDMIAATGEQVSSGLLAIALQEAGVDAVSYAGWQVPVKTDSAFTKARISEIDGER CCCCCEEEEEECCHHHHCCEEEEEEECCCCCEEEECCEEEEECCCCHHHHHHHHHCCHHH VLRDLDAGKVVVITGFQGIDPDGNITTLGRGGSDTSAVAVAAALKADECLIYTDVDGVYT HHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCEEE TDPRVVEEARRLDRVTFEEMLEMASLGSKVLQIRSVEFAGKYQVKTRVLSSLTDPLIPLD CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCHHHHHHHHHHHCCCCCCCC AEMKSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDV CCCCCCEEEEECCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCE DMIIQNQSVDGKTAFTFTVGRGDYQRAMDILTGQVKGHVQAEQVLGDPKVSKVSVVGVGM EEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEHHHHCCCCCCCEEEEEEECH RSHVGIASTMFRTLSEEGINIQMISTSEIKISVLIDEKYMELAVRALHKAFELDQA HHCCHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]