Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91784005

Identifier: 91784005

GI number: 91784005

Start: 2921660

End: 2924008

Strand: Reverse

Name: 91784005

Synonym: Bxe_A1800

Alternate gene names: NA

Gene position: 2924008-2921660 (Counterclockwise)

Preceding gene: 91784013

Following gene: 91784004

Centisome position: 59.72

GC content: 59.86

Gene sequence:

>2349_bases
ATGCATTTGAAAAAGCTGGTCGTCCGCAATTTCAGGCGGCTACGCAACGTCGTGATCGATCTTGCATCCGACATCTCGAT
TTTCGTCGGCGCGAACAACAGCGGCAAGACATCAGTTGGGCACGCCCTCCAGTTGTTCACCGGAGGCGGTCGTTTCAACA
TCCACGACTTCAGCGCCGAGCTTTGGCCCGACATCGTCGCGTTCGGTGAGGACGAAGGCGAAGGCGTAGGCGAATCGTCC
TTGCCTCAGATCGAAATCGACATCTGGCTCGAAATCGGCCCGGACGATGTTCACCGTGTCATCGATCTTCTGCCCAGCCT
GGCTTGGGAGGGCACGCTGGTGGGGATGCGTGTCGCCTACGCGCCCAGAAATCCTGCGGAGACGCGGGCGCGCTATGCGG
AAGTGCGTCAGCGCGCGCTCGATGCAGTCGCAAAGAATGAAGACGGAGCGCCAGTCTTTGACCCATCGCCACGTAACCTG
CGGGAGTTCCTCCGCGACAGGCTGCACGACGAATATGAGCTATGTCATTTCGTACTGGATCCTGCACGTTTCAGCGCGAA
TATGATCCCAGAGGATGGCTATGCCCCGGCCCCGCTAACCGGTCGCGACCGGAGTGGGCGTGAGATCTTGAACGGTCTTC
TTCATATCGACTTCTTGAACGCGCAACGCCATCTCTCGGACGGCCCTGGTGGCTCGCGCGCCGAGGATCTCTCCCACGTG
CTCAGTCGCTTCTATGGACGCAACCTCGAACAGAAAGGCGAAGATATCGAGGCGTTGCGTGCCCTGGCAGCGTCAGAGGT
CTCGCTCAATGAGCATCTTGAGCGGGTGTTCGAGCCGACGCTTAAGAGCTTGTCGAAGCTAGGTTATCCGGGTCTTTCAA
ACCCGCGCATGATGATCCGCTCGGCGCTCGACCCGGTCAAGATCATGAACGGGCGCGATGGTGCGATCGTCCACTATGCA
CTGGGTGGGGATGACGGGAATCCCGACCCGCCCACTTTGCCCGACCACTATAACGGCTTGGGCTTCAAGAACCTCATTTT
CATGGTTGTCGAACTGCTCGATCTTCACGCCCAGTGGCTGGCGATCGAGGGGAGCCGTCCGCCGGTCCACCTGATTTTTG
TCGAGGAGCCCGAGGCGCACCTTCACGCCCAGCTTCAACAGGCCTTCATCCGGAAAGTGATGGATATCCTCGCGCTTAAG
GACGAGGACCGCACGCACTATACGAGCCAAGTCGTCGTCACGACCCACTCGACTCACATTCTTTACGAACGAGGCTTCCG
GCCGATTCGCTATTTTCGTCGGAGCCGTTTGCAGAATGTACCGACCTCGGATGTCCTCAACCTATCGCTCTTCTACGACA
GCACTGACCCGGACATTCGGAGCTTTCTTGAGCGCTATTTGAAGCTTGCGCACTGCGATCTCTTTTTTGCCGACGGCGCC
GTGCTGGTCGAAGGCAATGTTGAACGGCTGCTGTTGCCGCAGATGATCGCCAATGCCGCGCCGCGACTGCAATCGACCTA
TCTCACCGTCCTAGAGATCGGCGGGGCGTTCGGCTTCCGATTCAAGACGCTGATCGAGTTTCTCGGCCTCACGACGCTTA
TTATCACCGACCTTGACAGCGTGTTTGGTCCACTGGCGCAGGACGGCGAGGACGCTGCCCATGTTCAGCCAGCACACGTG
GCGCCGCCTGCTGAGAATGCGGTGGCTCCGGACGCTGACGTCGAAGACACGGACGATGAAGATGAGGATGCGCCTGCGGC
GGCGGAGAAGCCCGGTAAGGCGTGCGTCGCCGGCCAACCCGGCGCAGCGACATCCAATCAGACGTTGGTCCAATGGCTAC
CGAAATGTGCGACGATCGCCGCCCTGTGGGCTGCGTCGGCTGAGCAGAAGATTCAGGCACGGGCGAACGACAATGACGCT
TTGGTACGGGTTGCCTATCAGTGCCGGACTGATGTGACCTGGGGCGGAGAAACCTTGGCGCTCGCCGGTCGTACGCTAGA
GGAAGCATTCGCGCTCGAAAATCTGGAATGGTGCCAACACAAAGACCGCAAGCCGCTTCAGCTCCGCATCGCTAAGGCTG
GCGAAAAGGACCTGGTTACGCTTGCGGAGCGTATCCACAAGCGGGTGCAGGCAAAGAGCTTCAGCAAGACCGACTTCGCG
CTCGCCTTGCTCGCCGAGGATCCGGGTAATTGGACGGTCCCGGCCTATATCGCCGAGGGCCTGTGCTGGCTGGAGACCGA
GATCGCGCCGCTGTCGCTAGACGATGGTGAAGACGGCGAGCAGCAAGAAGAAGGCGGTCTTGAGCTGGCGAACGGGGTGG
TTGTCGCTGGCGATGGGGTGGTTGCGTGA

Upstream 100 bases:

>100_bases
GGCCGGTCAAGGTCATCGCTTCCAGAGAAACGGTGTAGTAAGCTGCTTAAGAAAGCTGGCCTTTTGAGCACGCGGGTGGT
CCAATAACCGGGGGATGGGG

Downstream 100 bases:

>100_bases
CGAGCCGCATTGGCAGTCCCAACACGCAAGCCGACCTGGACGTTCGGGCGTGTCTCGATCGGATGCCGCCGCGCTCGTTC
GTCATGGTCGCCGGCGCAGG

Product: ATP-dependent endonuclease

Products: NA

Alternate protein names: ATP-Dependent Endonuclease OLD Family; ATP-Dependent Endonuclease; Overcoming Lysogenization Defect Protein; Pathogenesis Related Protein

Number of amino acids: Translated: 782; Mature: 782

Protein sequence:

>782_residues
MHLKKLVVRNFRRLRNVVIDLASDISIFVGANNSGKTSVGHALQLFTGGGRFNIHDFSAELWPDIVAFGEDEGEGVGESS
LPQIEIDIWLEIGPDDVHRVIDLLPSLAWEGTLVGMRVAYAPRNPAETRARYAEVRQRALDAVAKNEDGAPVFDPSPRNL
REFLRDRLHDEYELCHFVLDPARFSANMIPEDGYAPAPLTGRDRSGREILNGLLHIDFLNAQRHLSDGPGGSRAEDLSHV
LSRFYGRNLEQKGEDIEALRALAASEVSLNEHLERVFEPTLKSLSKLGYPGLSNPRMMIRSALDPVKIMNGRDGAIVHYA
LGGDDGNPDPPTLPDHYNGLGFKNLIFMVVELLDLHAQWLAIEGSRPPVHLIFVEEPEAHLHAQLQQAFIRKVMDILALK
DEDRTHYTSQVVVTTHSTHILYERGFRPIRYFRRSRLQNVPTSDVLNLSLFYDSTDPDIRSFLERYLKLAHCDLFFADGA
VLVEGNVERLLLPQMIANAAPRLQSTYLTVLEIGGAFGFRFKTLIEFLGLTTLIITDLDSVFGPLAQDGEDAAHVQPAHV
APPAENAVAPDADVEDTDDEDEDAPAAAEKPGKACVAGQPGAATSNQTLVQWLPKCATIAALWAASAEQKIQARANDNDA
LVRVAYQCRTDVTWGGETLALAGRTLEEAFALENLEWCQHKDRKPLQLRIAKAGEKDLVTLAERIHKRVQAKSFSKTDFA
LALLAEDPGNWTVPAYIAEGLCWLETEIAPLSLDDGEDGEQQEEGGLELANGVVVAGDGVVA

Sequences:

>Translated_782_residues
MHLKKLVVRNFRRLRNVVIDLASDISIFVGANNSGKTSVGHALQLFTGGGRFNIHDFSAELWPDIVAFGEDEGEGVGESS
LPQIEIDIWLEIGPDDVHRVIDLLPSLAWEGTLVGMRVAYAPRNPAETRARYAEVRQRALDAVAKNEDGAPVFDPSPRNL
REFLRDRLHDEYELCHFVLDPARFSANMIPEDGYAPAPLTGRDRSGREILNGLLHIDFLNAQRHLSDGPGGSRAEDLSHV
LSRFYGRNLEQKGEDIEALRALAASEVSLNEHLERVFEPTLKSLSKLGYPGLSNPRMMIRSALDPVKIMNGRDGAIVHYA
LGGDDGNPDPPTLPDHYNGLGFKNLIFMVVELLDLHAQWLAIEGSRPPVHLIFVEEPEAHLHAQLQQAFIRKVMDILALK
DEDRTHYTSQVVVTTHSTHILYERGFRPIRYFRRSRLQNVPTSDVLNLSLFYDSTDPDIRSFLERYLKLAHCDLFFADGA
VLVEGNVERLLLPQMIANAAPRLQSTYLTVLEIGGAFGFRFKTLIEFLGLTTLIITDLDSVFGPLAQDGEDAAHVQPAHV
APPAENAVAPDADVEDTDDEDEDAPAAAEKPGKACVAGQPGAATSNQTLVQWLPKCATIAALWAASAEQKIQARANDNDA
LVRVAYQCRTDVTWGGETLALAGRTLEEAFALENLEWCQHKDRKPLQLRIAKAGEKDLVTLAERIHKRVQAKSFSKTDFA
LALLAEDPGNWTVPAYIAEGLCWLETEIAPLSLDDGEDGEQQEEGGLELANGVVVAGDGVVA
>Mature_782_residues
MHLKKLVVRNFRRLRNVVIDLASDISIFVGANNSGKTSVGHALQLFTGGGRFNIHDFSAELWPDIVAFGEDEGEGVGESS
LPQIEIDIWLEIGPDDVHRVIDLLPSLAWEGTLVGMRVAYAPRNPAETRARYAEVRQRALDAVAKNEDGAPVFDPSPRNL
REFLRDRLHDEYELCHFVLDPARFSANMIPEDGYAPAPLTGRDRSGREILNGLLHIDFLNAQRHLSDGPGGSRAEDLSHV
LSRFYGRNLEQKGEDIEALRALAASEVSLNEHLERVFEPTLKSLSKLGYPGLSNPRMMIRSALDPVKIMNGRDGAIVHYA
LGGDDGNPDPPTLPDHYNGLGFKNLIFMVVELLDLHAQWLAIEGSRPPVHLIFVEEPEAHLHAQLQQAFIRKVMDILALK
DEDRTHYTSQVVVTTHSTHILYERGFRPIRYFRRSRLQNVPTSDVLNLSLFYDSTDPDIRSFLERYLKLAHCDLFFADGA
VLVEGNVERLLLPQMIANAAPRLQSTYLTVLEIGGAFGFRFKTLIEFLGLTTLIITDLDSVFGPLAQDGEDAAHVQPAHV
APPAENAVAPDADVEDTDDEDEDAPAAAEKPGKACVAGQPGAATSNQTLVQWLPKCATIAALWAASAEQKIQARANDNDA
LVRVAYQCRTDVTWGGETLALAGRTLEEAFALENLEWCQHKDRKPLQLRIAKAGEKDLVTLAERIHKRVQAKSFSKTDFA
LALLAEDPGNWTVPAYIAEGLCWLETEIAPLSLDDGEDGEQQEEGGLELANGVVVAGDGVVA

Specific function: Unknown

COG id: COG3593

COG function: function code L; Predicted ATP-dependent endonuclease of the OLD family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86200; Mature: 86200

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLKKLVVRNFRRLRNVVIDLASDISIFVGANNSGKTSVGHALQLFTGGGRFNIHDFSAE
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHEEEEEECCCEEEEECCCHH
LWPDIVAFGEDEGEGVGESSLPQIEIDIWLEIGPDDVHRVIDLLPSLAWEGTLVGMRVAY
HCCHHHCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEE
APRNPAETRARYAEVRQRALDAVAKNEDGAPVFDPSPRNLREFLRDRLHDEYELCHFVLD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC
PARFSANMIPEDGYAPAPLTGRDRSGREILNGLLHIDFLNAQRHLSDGPGGSRAEDLSHV
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECHHHHCCCCCCCCHHHHHHHH
LSRFYGRNLEQKGEDIEALRALAASEVSLNEHLERVFEPTLKSLSKLGYPGLSNPRMMIR
HHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SALDPVKIMNGRDGAIVHYALGGDDGNPDPPTLPDHYNGLGFKNLIFMVVELLDLHAQWL
HCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
AIEGSRPPVHLIFVEEPEAHLHAQLQQAFIRKVMDILALKDEDRTHYTSQVVVTTHSTHI
EEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEE
LYERGFRPIRYFRRSRLQNVPTSDVLNLSLFYDSTDPDIRSFLERYLKLAHCDLFFADGA
EHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEECCE
VLVEGNVERLLLPQMIANAAPRLQSTYLTVLEIGGAFGFRFKTLIEFLGLTTLIITDLDS
EEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VFGPLAQDGEDAAHVQPAHVAPPAENAVAPDADVEDTDDEDEDAPAAAEKPGKACVAGQP
HHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
GAATSNQTLVQWLPKCATIAALWAASAEQKIQARANDNDALVRVAYQCRTDVTWGGETLA
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCEEE
LAGRTLEEAFALENLEWCQHKDRKPLQLRIAKAGEKDLVTLAERIHKRVQAKSFSKTDFA
ECCHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEE
LALLAEDPGNWTVPAYIAEGLCWLETEIAPLSLDDGEDGEQQEEGGLELANGVVVAGDGV
EEEEEECCCCCEEHHHHHCCEEEEECCCCEEECCCCCCCCCHHHCCCEEECCEEEECCCC
VA
CC
>Mature Secondary Structure
MHLKKLVVRNFRRLRNVVIDLASDISIFVGANNSGKTSVGHALQLFTGGGRFNIHDFSAE
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHEEEEEECCCEEEEECCCHH
LWPDIVAFGEDEGEGVGESSLPQIEIDIWLEIGPDDVHRVIDLLPSLAWEGTLVGMRVAY
HCCHHHCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEE
APRNPAETRARYAEVRQRALDAVAKNEDGAPVFDPSPRNLREFLRDRLHDEYELCHFVLD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC
PARFSANMIPEDGYAPAPLTGRDRSGREILNGLLHIDFLNAQRHLSDGPGGSRAEDLSHV
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECHHHHCCCCCCCCHHHHHHHH
LSRFYGRNLEQKGEDIEALRALAASEVSLNEHLERVFEPTLKSLSKLGYPGLSNPRMMIR
HHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SALDPVKIMNGRDGAIVHYALGGDDGNPDPPTLPDHYNGLGFKNLIFMVVELLDLHAQWL
HCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
AIEGSRPPVHLIFVEEPEAHLHAQLQQAFIRKVMDILALKDEDRTHYTSQVVVTTHSTHI
EEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEE
LYERGFRPIRYFRRSRLQNVPTSDVLNLSLFYDSTDPDIRSFLERYLKLAHCDLFFADGA
EHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEECCE
VLVEGNVERLLLPQMIANAAPRLQSTYLTVLEIGGAFGFRFKTLIEFLGLTTLIITDLDS
EEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VFGPLAQDGEDAAHVQPAHVAPPAENAVAPDADVEDTDDEDEDAPAAAEKPGKACVAGQP
HHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
GAATSNQTLVQWLPKCATIAALWAASAEQKIQARANDNDALVRVAYQCRTDVTWGGETLA
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCEEE
LAGRTLEEAFALENLEWCQHKDRKPLQLRIAKAGEKDLVTLAERIHKRVQAKSFSKTDFA
ECCHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEE
LALLAEDPGNWTVPAYIAEGLCWLETEIAPLSLDDGEDGEQQEEGGLELANGVVVAGDGV
EEEEEECCCCCEEHHHHHCCEEEEECCCCEEECCCCCCCCCHHHCCCEEECCEEEECCCC
VA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA