Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91783995

Identifier: 91783995

GI number: 91783995

Start: 2907679

End: 2908506

Strand: Reverse

Name: 91783995

Synonym: Bxe_A1813

Alternate gene names: NA

Gene position: 2908506-2907679 (Counterclockwise)

Preceding gene: 91783997

Following gene: 91783994

Centisome position: 59.41

GC content: 62.56

Gene sequence:

>828_bases
TTGGAGTTCGGGCAAGCCGGGGCAGGGCGACGCGCATCGATCGCGCGTGTTCATCAATACTGGCCGGCGCTGGGAGTACT
GTGCTGCTCGATTGCATTCACGACCGGCGTCGGCGCATTGAGCCTCGCCAGCACAGAAGCACAAGCCGCCGCCCCGACGA
CGATCGGCATCGGCGTTGCTGCCGCGCCGCGCTATGAAGGCAGTAGCACCTATCACCTCGAACCGTTTCCGATTCTGTCC
GCATCGCGCGGCATTTTCTTTCTCGATGGACTCGAAGGCGGCGTTGCCTTTCCATTGGGCGGTAATCTGAAGACCGGCCT
GATCCTGTCGACCCAGTTTGGCCGCGACCAGAGCGACGGCGACCGGCTGAACGGCCTCGGCGACATCCATACCACGGCCG
GATTCGGTGCGTTTCTGGACTGGCATCCGGGCGCTTTCGATGCGTCGCTCAAGTTACTCCAGTCGTTGCACGCCGGTTAC
GGCGCTACGCTGACGCTGGAAACAAAATACACGTTCAAATTGGGCGCGCGCGACAGACTGACCGTTGGCAATGGCGCTGT
GTGGGCCAACAGGGGTTCGATGCAGACTTTCTTCGGCGTATCGCCTGTGCAGGCGGCGAGCAGCGCCGCGGGTCTGCCGG
TCTTTTCGCCGTCGGCGGGATTCAAGGACATCAGCACGTCGGCGACGTGGGTGCATCTCTTGAGCCGGAAGTGGTCGGTC
AATGGCACACTCCGGGTGGACCATCTGCTTGGCGATGCAGCGGAGAGTCCGGTTGTCGAGCACAGCACGTCGCTGTTCGG
CGGCGTAGGTGCAGCCTATACGTTCTGA

Upstream 100 bases:

>100_bases
GGATGTTTGAGTCCAGGCGCGTCGTTGCGAACGGGCCTGCAAGCCGATCAAGGAAACGACCAGGAGAATCACGTTGGCGC
ATCACTGCAAGACAAGGGCT

Downstream 100 bases:

>100_bases
TGCAGCGGTCTTCCCATTTCTCTTTCACGGACGCTAATTCCGGGTGAACGACACGGCGCAGCGCACATTTTCTCCCATCG
TTATGGCCGGCCGCTGGCGT

Product: putative exported (scaffolding) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MEFGQAGAGRRASIARVHQYWPALGVLCCSIAFTTGVGALSLASTEAQAAAPTTIGIGVAAAPRYEGSSTYHLEPFPILS
ASRGIFFLDGLEGGVAFPLGGNLKTGLILSTQFGRDQSDGDRLNGLGDIHTTAGFGAFLDWHPGAFDASLKLLQSLHAGY
GATLTLETKYTFKLGARDRLTVGNGAVWANRGSMQTFFGVSPVQAASSAAGLPVFSPSAGFKDISTSATWVHLLSRKWSV
NGTLRVDHLLGDAAESPVVEHSTSLFGGVGAAYTF

Sequences:

>Translated_275_residues
MEFGQAGAGRRASIARVHQYWPALGVLCCSIAFTTGVGALSLASTEAQAAAPTTIGIGVAAAPRYEGSSTYHLEPFPILS
ASRGIFFLDGLEGGVAFPLGGNLKTGLILSTQFGRDQSDGDRLNGLGDIHTTAGFGAFLDWHPGAFDASLKLLQSLHAGY
GATLTLETKYTFKLGARDRLTVGNGAVWANRGSMQTFFGVSPVQAASSAAGLPVFSPSAGFKDISTSATWVHLLSRKWSV
NGTLRVDHLLGDAAESPVVEHSTSLFGGVGAAYTF
>Mature_275_residues
MEFGQAGAGRRASIARVHQYWPALGVLCCSIAFTTGVGALSLASTEAQAAAPTTIGIGVAAAPRYEGSSTYHLEPFPILS
ASRGIFFLDGLEGGVAFPLGGNLKTGLILSTQFGRDQSDGDRLNGLGDIHTTAGFGAFLDWHPGAFDASLKLLQSLHAGY
GATLTLETKYTFKLGARDRLTVGNGAVWANRGSMQTFFGVSPVQAASSAAGLPVFSPSAGFKDISTSATWVHLLSRKWSV
NGTLRVDHLLGDAAESPVVEHSTSLFGGVGAAYTF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 28571; Mature: 28571

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFGQAGAGRRASIARVHQYWPALGVLCCSIAFTTGVGALSLASTEAQAAAPTTIGIGVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHCCCCEEEECEE
AAPRYEGSSTYHLEPFPILSASRGIFFLDGLEGGVAFPLGGNLKTGLILSTQFGRDQSDG
ECCCCCCCCEEEECCCCEEECCCCEEEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCC
DRLNGLGDIHTTAGFGAFLDWHPGAFDASLKLLQSLHAGYGATLTLETKYTFKLGARDRL
CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCEE
TVGNGAVWANRGSMQTFFGVSPVQAASSAAGLPVFSPSAGFKDISTSATWVHLLSRKWSV
EECCCEEEECCCCCEEEECCCHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCC
NGTLRVDHLLGDAAESPVVEHSTSLFGGVGAAYTF
CCEEEEHHHHCCCCCCCHHHHCHHHHCCCCCCCCC
>Mature Secondary Structure
MEFGQAGAGRRASIARVHQYWPALGVLCCSIAFTTGVGALSLASTEAQAAAPTTIGIGVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHCCCCEEEECEE
AAPRYEGSSTYHLEPFPILSASRGIFFLDGLEGGVAFPLGGNLKTGLILSTQFGRDQSDG
ECCCCCCCCEEEECCCCEEECCCCEEEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCC
DRLNGLGDIHTTAGFGAFLDWHPGAFDASLKLLQSLHAGYGATLTLETKYTFKLGARDRL
CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCEE
TVGNGAVWANRGSMQTFFGVSPVQAASSAAGLPVFSPSAGFKDISTSATWVHLLSRKWSV
EECCCEEEECCCCCEEEECCCHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCC
NGTLRVDHLLGDAAESPVVEHSTSLFGGVGAAYTF
CCEEEEHHHHCCCCCCCHHHHCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]