| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91783947
Identifier: 91783947
GI number: 91783947
Start: 2859961
End: 2860992
Strand: Direct
Name: 91783947
Synonym: Bxe_A1864
Alternate gene names: NA
Gene position: 2859961-2860992 (Clockwise)
Preceding gene: 91783944
Following gene: 91783948
Centisome position: 58.42
GC content: 65.79
Gene sequence:
>1032_bases ATGAGCGCACTGCCGCAGACAGCCGCCTGGGCTGTCGACGAATATCAGCTTGACCGCACCGCCGGCGTTGAAGAGAAACT GAAATTCGCGCTGCGCTACGCAGTGCTCGCACCGTCGAACCATAATACGCAGCCCTGGCACTTCATTCTGGATGGCGACA GCGTGACGTTATGCGCCGACCGGTTGCGCGCGCTGCCGGTGGTCGATCCATTCGACCGCGAACTGATCATGAGTTGCGGT GCGGCGCTGCTCAATCTGCGCGTGGCGCTGAGCCACTTCGGCCTTGCCTACGCGATCACGCCATTTCCGTCTTCCGCCGA CCCCGACGTGCTGGCGCATTTGCGAATCGTCCCTGACGGACATTGCGACGCCAGTCTCACGCCGCTCTTCGCGGCGATTC CACGCCGCGTCACCACCCGCGAAATCTTCGTGGACGAACCGCTGCCTTCGCTCATCCAGCAACAGCTCGAAGAAGCCGCC GAAGCCGAAGGCGCGGATGTGGTCTGCATCTCGAACGCGCCGATGCGCGAGAGTCTTGCCGAACTAATCGCCGAGGCCGA TCGGGTGCAGTTCAAGGACCCGCGTTTTCGCCGTGAACTGGCCAGCTGGATTCATCCGCGACGCCATGCGGACGGTATGC CCGCGCTGTCCGCCGGCATGAGCGTGCTGCTCGATCTGGCCGCGCCGCTACTCACCTCCGTCATTCGAACCTTCGACCTG GGCGGTGGCTTGGCGGCGGCGCATCATGCGCTGGCTGCGGGCTCGCCGCTGCTCATTTGCCTCGCGACGCCGACAGACGA TGCCGCCGCCTGGCTGGCGGCCGGCCAGGCACTGGAGCGGCTGCTGCTGGTCGCCGCGAATGCCGGGATCACGGCGTCCT ATCTGAATCAGCCGATCGAGCTGAGCGGGCTTCGTGAGCGGCTAGGCGCCGTGCTGGCGATAGACGCGACGCCGCAACTG CTGTTACGCGTCGGCCGCGGCAAGCCGGCGCCTCATTCGCCGCGCCGGCCGCTTGCCGAGGTTGTTTCCTGA
Upstream 100 bases:
>100_bases AAGTCACCGTGGCCCGTTCAATGCGGAATGATCCAGATCAATCCGCGTACGGTGCATGCCTGACACAGTGGCGTTATGAA ATCGTGCAGGGGATCATCAC
Downstream 100 bases:
>100_bases GGCGCGACGCCCGCTCAACGCCTGTTCGACGAGGCCGCGATGAAACACTTTTTCAGACTCGGTACTGCGACGCGCGATCC GGCCCGCGCGCGCCCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSALPQTAAWAVDEYQLDRTAGVEEKLKFALRYAVLAPSNHNTQPWHFILDGDSVTLCADRLRALPVVDPFDRELIMSCG AALLNLRVALSHFGLAYAITPFPSSADPDVLAHLRIVPDGHCDASLTPLFAAIPRRVTTREIFVDEPLPSLIQQQLEEAA EAEGADVVCISNAPMRESLAELIAEADRVQFKDPRFRRELASWIHPRRHADGMPALSAGMSVLLDLAAPLLTSVIRTFDL GGGLAAAHHALAAGSPLLICLATPTDDAAAWLAAGQALERLLLVAANAGITASYLNQPIELSGLRERLGAVLAIDATPQL LLRVGRGKPAPHSPRRPLAEVVS
Sequences:
>Translated_343_residues MSALPQTAAWAVDEYQLDRTAGVEEKLKFALRYAVLAPSNHNTQPWHFILDGDSVTLCADRLRALPVVDPFDRELIMSCG AALLNLRVALSHFGLAYAITPFPSSADPDVLAHLRIVPDGHCDASLTPLFAAIPRRVTTREIFVDEPLPSLIQQQLEEAA EAEGADVVCISNAPMRESLAELIAEADRVQFKDPRFRRELASWIHPRRHADGMPALSAGMSVLLDLAAPLLTSVIRTFDL GGGLAAAHHALAAGSPLLICLATPTDDAAAWLAAGQALERLLLVAANAGITASYLNQPIELSGLRERLGAVLAIDATPQL LLRVGRGKPAPHSPRRPLAEVVS >Mature_342_residues SALPQTAAWAVDEYQLDRTAGVEEKLKFALRYAVLAPSNHNTQPWHFILDGDSVTLCADRLRALPVVDPFDRELIMSCGA ALLNLRVALSHFGLAYAITPFPSSADPDVLAHLRIVPDGHCDASLTPLFAAIPRRVTTREIFVDEPLPSLIQQQLEEAAE AEGADVVCISNAPMRESLAELIAEADRVQFKDPRFRRELASWIHPRRHADGMPALSAGMSVLLDLAAPLLTSVIRTFDLG GGLAAAHHALAAGSPLLICLATPTDDAAAWLAAGQALERLLLVAANAGITASYLNQPIELSGLRERLGAVLAIDATPQLL LRVGRGKPAPHSPRRPLAEVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 36795; Mature: 36664
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALPQTAAWAVDEYQLDRTAGVEEKLKFALRYAVLAPSNHNTQPWHFILDGDSVTLCAD CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCHHHHHH RLRALPVVDPFDRELIMSCGAALLNLRVALSHFGLAYAITPFPSSADPDVLAHLRIVPDG HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCC HCDASLTPLFAAIPRRVTTREIFVDEPLPSLIQQQLEEAAEAEGADVVCISNAPMRESLA CCCCCHHHHHHHHCCCCCHHEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH ELIAEADRVQFKDPRFRRELASWIHPRRHADGMPALSAGMSVLLDLAAPLLTSVIRTFDL HHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GGGLAAAHHALAAGSPLLICLATPTDDAAAWLAAGQALERLLLVAANAGITASYLNQPIE CCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCH LSGLRERLGAVLAIDATPQLLLRVGRGKPAPHSPRRPLAEVVS HHHHHHHCCEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure SALPQTAAWAVDEYQLDRTAGVEEKLKFALRYAVLAPSNHNTQPWHFILDGDSVTLCAD CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCHHHHHH RLRALPVVDPFDRELIMSCGAALLNLRVALSHFGLAYAITPFPSSADPDVLAHLRIVPDG HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCC HCDASLTPLFAAIPRRVTTREIFVDEPLPSLIQQQLEEAAEAEGADVVCISNAPMRESLA CCCCCHHHHHHHHCCCCCHHEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH ELIAEADRVQFKDPRFRRELASWIHPRRHADGMPALSAGMSVLLDLAAPLLTSVIRTFDL HHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GGGLAAAHHALAAGSPLLICLATPTDDAAAWLAAGQALERLLLVAANAGITASYLNQPIE CCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCH LSGLRERLGAVLAIDATPQLLLRVGRGKPAPHSPRRPLAEVVS HHHHHHHCCEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]