| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yflP [H]
Identifier: 91783767
GI number: 91783767
Start: 2663525
End: 2664523
Strand: Reverse
Name: yflP [H]
Synonym: Bxe_A2047
Alternate gene names: 91783767
Gene position: 2664523-2663525 (Counterclockwise)
Preceding gene: 91783768
Following gene: 91783766
Centisome position: 54.42
GC content: 63.16
Gene sequence:
>999_bases ATGAGGAGGAGGCTTGAGATATCAGGTGTCGCGCGTGGCATCTGTGTCGTGCTGCTATCGGCGTGCGCGACGCTGGCGAG CGCCGCGGACACGTGGCAGCCCCGACGGCCGGTCGAGATCGTGGTGCCGAGCGCGCCTGGTGGAGGACTCGATCTGGTTG CCCGCACGCTGCAGAGCGTCATTCAGCAGGAGAAGCTGTCGCCCCGGCCCGTTACGGTCATCAACCGGCCTGGCGGAGGC GGCACGGTCAGTATCGCGTACATCAATTCACACGAAGGCGACGGCCACTTTGTCACGGTAGAGGCGCTGCCGCTGATCAC CAACCGGATTACGGGCCTTTCCACGGTAGGTATCGACGACGTGACGCCGCTTGCCGTGTTCGTGACCGAGCAGGTGGTGT TCTCGGTGCCGGGCAATTCGCCGATCAAGTCGGGCAGCGATCTCGTGCAGATGCTCAAGAAAGATCCCACCAGCGTCACG CTGGGCGTGTCGAGTTCGCCGGGCGGTCAGAGTCACGACGCCGCGGCGCTCGTGATGAAAGGCGCCGGCCAGGATCCGAA GAAAATCAAAGTCGTATTTTTCGATTCAGGCGGTGAAGCGTTGACGGCGTTGATGGGCGGCCACGTAACGGCTGCCGCGA CGCCTGCGGGCGTGGTGTTGGGACCGAGCAAGTCCGGCGCGGTGCGCATGATTGCGATTCCCGCCGGCGCGCGTCAGGGC GGCGAACTGGCAGGCGTGCCGACGTGGAAGGAGCAGGGCATCAATGTGGACTTTACGACCTGGCGCGTGCTGGTCGGTCC GAAGAACATGACGGCCGCCGAAATAGCGTGGTGGGACAACGTATTGCAGAAGGCTACCTCGTCGCCGGAGTGGGCCGTGG CCGTGAAACGGAATCTTTGGACTGCAGACTATAAAAACAGCACTCAGACCCGTGCATTTCTTCAGGACGAGCGCAATCGC CTGACCCCTCTGCTTGGCGAGCTTGGCATCGCGAAGTAG
Upstream 100 bases:
>100_bases TCCAGAACGAGGTGCCAATGGAAAGCCTCTTCGCCGCCAGTACATTCGACGCATTCAATTTCTAAACGGCCACAGAGCAC TATAAACAGGAGACGAAGTG
Downstream 100 bases:
>100_bases CGAATCTTTCTTCCAACCCGCAGTACCTATCGACATGGAGATCCATATGTCACGCATCGTTCACCTCGCAGTCAAGGTCG ACGACCTCGAACAGGCGACC
Product: tricarboxylic transporter, periplasmic ligand binding protein, TctC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSVIQQEKLSPRPVTVINRPGGG GTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDDVTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVT LGVSSSPGGQSHDAAALVMKGAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLWTADYKNSTQTRAFLQDERNR LTPLLGELGIAK
Sequences:
>Translated_332_residues MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSVIQQEKLSPRPVTVINRPGGG GTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDDVTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVT LGVSSSPGGQSHDAAALVMKGAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLWTADYKNSTQTRAFLQDERNR LTPLLGELGIAK >Mature_332_residues MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSVIQQEKLSPRPVTVINRPGGG GTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDDVTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVT LGVSSSPGGQSHDAAALVMKGAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLWTADYKNSTQTRAFLQDERNR LTPLLGELGIAK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34796; Mature: 34796
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSV CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH IQQEKLSPRPVTVINRPGGGGTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDD HHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEHHHHHCCCCEECCCCC VTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVTLGVSSSPGGQSHDAAALVMK CCHHEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEE GAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG CCCCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEEECCCCCCC GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLW CCCCCCCCHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEE TADYKNSTQTRAFLQDERNRLTPLLGELGIAK ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSV CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH IQQEKLSPRPVTVINRPGGGGTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDD HHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEHHHHHCCCCEECCCCC VTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVTLGVSSSPGGQSHDAAALVMK CCHHEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEE GAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG CCCCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEEECCCCCCC GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLW CCCCCCCCHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEE TADYKNSTQTRAFLQDERNRLTPLLGELGIAK ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]