Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is cbdA [H]

Identifier: 91783709

GI number: 91783709

Start: 2603471

End: 2604754

Strand: Direct

Name: cbdA [H]

Synonym: Bxe_A2105

Alternate gene names: 91783709

Gene position: 2603471-2604754 (Clockwise)

Preceding gene: 91783707

Following gene: 91783710

Centisome position: 53.18

GC content: 62.54

Gene sequence:

>1284_bases
ATGAGCGAATCCCCGTATCAGAGCGTCGACGCGAGCGCGTTGTATCAGCGCGCGCAGTCCGATCGCGTGGCCCCGTCGCT
GTACTACGACCCTGCCGTTTTCGAAGCGGAACTCGAACGCATTTTCTACAAGACATGGGTCTGGGTCGCGCACGAAAGCG
AATTGCCGGATCCGGGCGACTTCCGCACCACCACGATCGGCCGTCAGCCGGTGATCGTGGTGCGCGACAAGACCGGCGCG
GTCAACGTATTGCAGAACCGCTGCCGCCACCGCGGCGCAACCGTCTGCGAACAGCACAAGGGCAACGCCAAAGGCTTCAC
GTGCCCTTATCACAGCTGGACCTATGGTCTCGACGGCGCACTGCGCGCACTGCCGTACGGCGACGGTTACGAAGGCGTGA
TCGACAAGACCGAGCTGCCGCTCGCCAGCCTGCGCGTGGGCATCTATCAAGGCCTGATCTTCGCGAGCTTCAATCAGGAG
ATCGAGCCGCTCGAAGATTTCCTCGGCGGTGCGAAACCGTGGATCGACCTGTTCATGAAGCAAGGCGCCGGCTATCCGGT
CAAGACCAACGGCGAGCATCGCTTTCGCTTTAACGGCAACTGGAAGATCCAGCTCGAGAACACCACGGATCTGTATCACT
TCCCCGTGGTCCACAAGTCGTGGCTGAAATCGATCGACGAGGAAACCACCGCCGCGATCACGAGCTTCATGACAAGCGAC
CAGGCTTTCTGCCGTTCGCTCGGCAACGGCCACAGCCTCGCCGTGCTGATGCCGGAACTAGTCGATCTCGACCGCGATGA
CGGCGCGCCGATCCCCGAGCGCTTCACAGAGCTGGCCGCGTCACTCGCAAAAGACCACACGCCGGAACAAGTGCGCCGTA
TCGTGCGCTCGCTGATGGGCGTCGGCTTCAATCTGAATCTGTTTCCGAACCTCGCGCTGTCGATGGCGTTTTTCCGCGTA
CTGCGGCCCATTTCCGCGAACGAGACCGAGATCCGTCATGTCGCCCTCGCAATGGACGGCGGCCCCGAAGAAGCGAACCG
TGTGCGCCTGCGCATTCACGAACACTTCCAGGGCCCGTTCGGTTTCGGCAGTCCGGACGACGCCGAAGCGTGGGAACGCG
TGCAGCGCGGCTCGCACGCCGGCCCCGATCTGCCGATTCTCGTCAACCGTGGCCTGAATCGCGAGAGCACGGCGCCGAAT
GGCGAAAAAACCGCCCACGCCACGGACGAAACCGGCATGCGCGAAGCTTACGCGCAATGGCGCACGATGATGGAGCAGGC
ATGA

Upstream 100 bases:

>100_bases
ATATCCATGCGGTTGATTTTATATTTCATTTTAGATCAATTTGACGCATATCAACGGGTCGGCGAGACTGGCCTTCATCC
ACCACCCCACCTGCATAGCC

Downstream 100 bases:

>100_bases
TGGACGACAGGAACACGCTGTTTTCGCAGAAGACATTCACCGGCGCGATCGAACTCATCTGGCGCGAAGCGGAACTGCTG
GACCGCAAGGACTATCGCGA

Product: putative (poly)aromatic ring hydroxylating dioxygenase, alpha subunit (Rieske (2Fe-2S) region)

Products: NA

Alternate protein names: 2-chlorobenzoate 1,2-dioxygenase [H]

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSESPYQSVDASALYQRAQSDRVAPSLYYDPAVFEAELERIFYKTWVWVAHESELPDPGDFRTTTIGRQPVIVVRDKTGA
VNVLQNRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGALRALPYGDGYEGVIDKTELPLASLRVGIYQGLIFASFNQE
IEPLEDFLGGAKPWIDLFMKQGAGYPVKTNGEHRFRFNGNWKIQLENTTDLYHFPVVHKSWLKSIDEETTAAITSFMTSD
QAFCRSLGNGHSLAVLMPELVDLDRDDGAPIPERFTELAASLAKDHTPEQVRRIVRSLMGVGFNLNLFPNLALSMAFFRV
LRPISANETEIRHVALAMDGGPEEANRVRLRIHEHFQGPFGFGSPDDAEAWERVQRGSHAGPDLPILVNRGLNRESTAPN
GEKTAHATDETGMREAYAQWRTMMEQA

Sequences:

>Translated_427_residues
MSESPYQSVDASALYQRAQSDRVAPSLYYDPAVFEAELERIFYKTWVWVAHESELPDPGDFRTTTIGRQPVIVVRDKTGA
VNVLQNRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGALRALPYGDGYEGVIDKTELPLASLRVGIYQGLIFASFNQE
IEPLEDFLGGAKPWIDLFMKQGAGYPVKTNGEHRFRFNGNWKIQLENTTDLYHFPVVHKSWLKSIDEETTAAITSFMTSD
QAFCRSLGNGHSLAVLMPELVDLDRDDGAPIPERFTELAASLAKDHTPEQVRRIVRSLMGVGFNLNLFPNLALSMAFFRV
LRPISANETEIRHVALAMDGGPEEANRVRLRIHEHFQGPFGFGSPDDAEAWERVQRGSHAGPDLPILVNRGLNRESTAPN
GEKTAHATDETGMREAYAQWRTMMEQA
>Mature_426_residues
SESPYQSVDASALYQRAQSDRVAPSLYYDPAVFEAELERIFYKTWVWVAHESELPDPGDFRTTTIGRQPVIVVRDKTGAV
NVLQNRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGALRALPYGDGYEGVIDKTELPLASLRVGIYQGLIFASFNQEI
EPLEDFLGGAKPWIDLFMKQGAGYPVKTNGEHRFRFNGNWKIQLENTTDLYHFPVVHKSWLKSIDEETTAAITSFMTSDQ
AFCRSLGNGHSLAVLMPELVDLDRDDGAPIPERFTELAASLAKDHTPEQVRRIVRSLMGVGFNLNLFPNLALSMAFFRVL
RPISANETEIRHVALAMDGGPEEANRVRLRIHEHFQGPFGFGSPDDAEAWERVQRGSHAGPDLPILVNRGLNRESTAPNG
EKTAHATDETGMREAYAQWRTMMEQA

Specific function: Component of 2-halobenzoate dioxygenase multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into 2-halobenzoate to form catechol [H]

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788888, Length=442, Percent_Identity=29.185520361991, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1788103, Length=201, Percent_Identity=28.3582089552239, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR015879
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]

EC number: =1.14.12.13 [H]

Molecular weight: Translated: 47900; Mature: 47769

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS00570 RING_HYDROXYL_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESPYQSVDASALYQRAQSDRVAPSLYYDPAVFEAELERIFYKTWVWVAHESELPDPGD
CCCCCCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCC
FRTTTIGRQPVIVVRDKTGAVNVLQNRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGA
CEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCEECCCCCCCCCCCCH
LRALPYGDGYEGVIDKTELPLASLRVGIYQGLIFASFNQEIEPLEDFLGGAKPWIDLFMK
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
QGAGYPVKTNGEHRFRFNGNWKIQLENTTDLYHFPVVHKSWLKSIDEETTAAITSFMTSD
CCCCCCEECCCCEEEEECCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCH
QAFCRSLGNGHSLAVLMPELVDLDRDDGAPIPERFTELAASLAKDHTPEQVRRIVRSLMG
HHHHHHCCCCCEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
VGFNLNLFPNLALSMAFFRVLRPISANETEIRHVALAMDGGPEEANRVRLRIHEHFQGPF
CCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCC
GFGSPDDAEAWERVQRGSHAGPDLPILVNRGLNRESTAPNGEKTAHATDETGMREAYAQW
CCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RTMMEQA
HHHHHCC
>Mature Secondary Structure 
SESPYQSVDASALYQRAQSDRVAPSLYYDPAVFEAELERIFYKTWVWVAHESELPDPGD
CCCCCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCC
FRTTTIGRQPVIVVRDKTGAVNVLQNRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGA
CEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCEECCCCCCCCCCCCH
LRALPYGDGYEGVIDKTELPLASLRVGIYQGLIFASFNQEIEPLEDFLGGAKPWIDLFMK
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
QGAGYPVKTNGEHRFRFNGNWKIQLENTTDLYHFPVVHKSWLKSIDEETTAAITSFMTSD
CCCCCCEECCCCEEEEECCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCH
QAFCRSLGNGHSLAVLMPELVDLDRDDGAPIPERFTELAASLAKDHTPEQVRRIVRSLMG
HHHHHHCCCCCEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
VGFNLNLFPNLALSMAFFRVLRPISANETEIRHVALAMDGGPEEANRVRLRIHEHFQGPF
CCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCC
GFGSPDDAEAWERVQRGSHAGPDLPILVNRGLNRESTAPNGEKTAHATDETGMREAYAQW
CCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RTMMEQA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7530709; 1370284 [H]