| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783467
Identifier: 91783467
GI number: 91783467
Start: 2310854
End: 2311630
Strand: Direct
Name: 91783467
Synonym: Bxe_A2349
Alternate gene names: NA
Gene position: 2310854-2311630 (Clockwise)
Preceding gene: 91783466
Following gene: 161621317
Centisome position: 47.2
GC content: 61.26
Gene sequence:
>777_bases ATGACACCGATTCTTGTTTTCGACATCGAGACGATTCCCGATGTCGCCGGCATTCGCCGCCTCGAAGATCTGCCCGCCAC GCTCAGCGACGCCGAAGTCGCCGAGCATGCGTTCGCCGCGCGCCGCGAAAAGACCGGCGGCGATTTCCTGCCGCATCATC TGCAACGGATCGCGGCGATTTCCTGTGTGTTCCGCGACAACAACGGCTTCCGGGTCCGCTCGCTCGGTACGCTGGAAGAC GGTGAGGCGGCGCTGGTGCAGTCGTTTTATCGCGTGATCGAGAAGTACACGCCGCAGCTCGTGTCGTGGAACGGCGGCGG ATTCGACCTGCCGGTGCTGAACTACCGCGCACTCGTCAACGGCATTCCCGCCTACAAGTTCTGGGACCTCGGCGAGGACG ACCGCGAGTTCAAGTGGAACAACTACATCAGCCGCTATCACGCGCGTCACACGGATCTGATGGACGTGCTCGCCATGTAT CAGGCGCGCGCCAACGCGCCGCTCGACGCGCTCGCCAAAATGTGCGGCTTCCCCGGCAAGATGGGCATGGACGGCAGCCA GGTGTGGCACGCGTACCAGGAAGGGCGCCTCGAAGAGATCCGCAATTACTGCGAGACCGACGTCGTCAATACTTATTTGC TCTATTGCCGCTTCCAGTTGATTCGCGGCGCGTTTTCGCCCGCTGAGTATGCTGATGAGATCAACCTGGTCAAGAATGCA CTGGCGCTGGAAACGGCGCCGCAATGGGCCGAGTATCTGGCGGCATTCGATCAGTAA
Upstream 100 bases:
>100_bases ACGCGCGAGCGTGTGCGCCAGATCCAACAGGAAGCGCTCGTGCGGTTAAAGCGCTTCTTCGCCTCCAACGGTGTTCGGAA AGACGCCGTTCTATAACCTG
Downstream 100 bases:
>100_bases GTGGCTTGTAGTCGGGCCGCGGAGGGGCCCGCAGGGCGGCGCGGGTAGCGAGGCCGCCGCGGTCTTTCGCTCCAAAGGCT CCAAAGGTGCAAGGCGGTGC
Product: putative 3'-5' exonuclease
Products: NA
Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAISCVFRDNNGFRVRSLGTLED GEAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVNGIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMY QARANAPLDALAKMCGFPGKMGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNA LALETAPQWAEYLAAFDQ
Sequences:
>Translated_258_residues MTPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAISCVFRDNNGFRVRSLGTLED GEAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVNGIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMY QARANAPLDALAKMCGFPGKMGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNA LALETAPQWAEYLAAFDQ >Mature_257_residues TPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAISCVFRDNNGFRVRSLGTLEDG EAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVNGIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMYQ ARANAPLDALAKMCGFPGKMGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNAL ALETAPQWAEYLAAFDQ
Specific function: Unknown
COG id: COG3298
COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29298; Mature: 29167
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAI CCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SCVFRDNNGFRVRSLGTLEDGEAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVN HHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHC GIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMYQARANAPLDALAKMCGFPGK CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC MGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNA CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LALETAPQWAEYLAAFDQ HHHHCCHHHHHHHHHHCC >Mature Secondary Structure TPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAI CCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SCVFRDNNGFRVRSLGTLEDGEAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVN HHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHC GIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMYQARANAPLDALAKMCGFPGK CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC MGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNA CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LALETAPQWAEYLAAFDQ HHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA