| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is recR [H]
Identifier: 91783457
GI number: 91783457
Start: 2300749
End: 2301345
Strand: Direct
Name: recR [H]
Synonym: Bxe_A2359
Alternate gene names: 91783457
Gene position: 2300749-2301345 (Clockwise)
Preceding gene: 91783456
Following gene: 91783458
Centisome position: 46.99
GC content: 65.16
Gene sequence:
>597_bases ATGAAACAACCTTCCGCCTTGTCGGCGCTCGTCGAAGCGCTGCGCGCGCTGCCTGGCGTCGGGCCGAAGTCCGCGCAACG CATGGCGTACCACCTGATGCAGCACGACCGCGACGGCGCCGAAAAACTCGGCCGCTCGCTGCTGTTCGCCACCGAGCATC TGCAGCACTGCGAGAAGTGCAACACCTTCACCGAAGCGCAGATCTGCGAGGTCTGCCTCGACGAGGAGCGCGATCCCACC TTGCTGTGCGTCGTCGAAACGCCTGCCGACCAGATCATGCTCGAGCAGACCATGACCTATCGCGGTCTTTATTTCGTGCT GATGGGGCGCCTGAGTCCGCTCGACGGTATCGGTCCGAAGGAGATTCATTTCGACCGGCTCGTCCGGCGCGCGTCGGACG GCGTGGTCAAGGAAGTGGTGCTCGCAACCAATTTCACCAACGAAGGCGAAGCGACCGCGCATTACCTCGGGCAGACGCTC AAGGCGCGCGGCCTCGCCGTCACGCGTCTTGCGCGCGGCGTGCCGGTGGGTGGCGAACTGGAGTACGTGGACGCCGGCAC GATCGCCCGCGCCATGCTCGATCGCCGCTCGATGTAG
Upstream 100 bases:
>100_bases GCGCGCCACGCGAGGCCGTCGCCGCAATGATGGAAACCGAACGAATCACCTGTATCGCCACCCGCATAACCGGGCGCTAC CCACTTCGACGCCGATCCGC
Downstream 100 bases:
>100_bases CGCGAGGCGCCGGTTTCAACCTGACGCAGCGCAGCGCGCGTCAGGATCAGAACAAAGGAGACACATGAGCGTCACCCCTG AATCAGGCGCGGGCGCCGCG
Product: recombination protein RecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKCNTFTEAQICEVCLDEERDPT LLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTL KARGLAVTRLARGVPVGGELEYVDAGTIARAMLDRRSM
Sequences:
>Translated_198_residues MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKCNTFTEAQICEVCLDEERDPT LLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTL KARGLAVTRLARGVPVGGELEYVDAGTIARAMLDRRSM >Mature_198_residues MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKCNTFTEAQICEVCLDEERDPT LLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTL KARGLAVTRLARGVPVGGELEYVDAGTIARAMLDRRSM
Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]
COG id: COG0353
COG function: function code L; Recombinational DNA repair protein (RecF pathway)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=49.2462311557789, Blast_Score=196, Evalue=6e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003583 - InterPro: IPR000093 - InterPro: IPR006171 - InterPro: IPR015967 [H]
Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]
EC number: NA
Molecular weight: Translated: 21856; Mature: 21856
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS01300 RECR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKC CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC NTFTEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPK CCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH EIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGEL HHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCE EYVDAGTIARAMLDRRSM EEECHHHHHHHHHHHCCC >Mature Secondary Structure MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKC CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC NTFTEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPK CCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH EIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGEL HHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCE EYVDAGTIARAMLDRRSM EEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA