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The map label for this gene is yfdE [H]

Identifier: 91783458

GI number: 91783458

Start: 2301410

End: 2302651

Strand: Direct

Name: yfdE [H]

Synonym: Bxe_A2358

Alternate gene names: 91783458

Gene position: 2301410-2302651 (Clockwise)

Preceding gene: 91783457

Following gene: 91783459

Centisome position: 47.01

GC content: 65.22

Gene sequence:

>1242_bases
ATGAGCGTCACCCCTGAATCAGGCGCGGGCGCCGCGCCTCAAGAGAAAACCGGCCCGCTCGCCGGCGTCAAGGTGCTGGA
ACTCGGCACGCTGATCGCCGGTCCGTTCGCCGCGCGCTTTCTCGGCGAATTCGGCGCCGACGTCGTCAAGATCGAAGATC
CCAAAGGCGGCGACCCGCTGCGCAAGTGGCGCAAGCTTTATCCGGAAGTCGGCGGCACGTCGCTCTGGTGGGCCGTGCAG
GCACGCAACAAGAAATCCGTCACGATCAATCTGAAGGCCGAAGAGGGCAAGGAGATCGTGCGGCGCCTCGCGAAGGAAGC
GGATATCGTCGTCGAAAATTTCCGGCCGGGTTTGCTGGAGAAACTCGGGCTCGGTTACGACGTGCTGTCCGCGGAAAATC
CCGGCCTCGTCATGGTGCGCCTGTCCGGCTATGGCCAGACCGGGCCGTACCGCGACCGGCCCGGCTTCGGCGCGATCGCC
GAATCGATGGGCGGCCTGCGGCATATCACCGGTTATCCGGATTTGCCGCCGCCGCGCATCGGCATTTCGATCGGCGATTC
GATCGCCGCGCTGCACGGCGTGATCGGCGCGCTGATGGCGCTGCATCACAAGCAGGTGAACGGCGGCAAGGGGCAGGTGG
TCGACGTGGCGCTGTACGAGGCCGTCTTCAACATGATGGAAAGCGTGGTGCCCGAATACGGCGTGTACGGCATGGTGCGC
GAGCGCACCGGCGCGTCGCTGCCCGGGATCGTGCCGTCCAATACGTATCCGTGCCGCGACGGCAGCATCGTGATCGGCGG
CAATAGCGATCCGATCTTCAGGCGCCTGATGATGGCGATCGACCGCGAGGATCTCGCGAACGACCCGACGCTCGCGCACA
ACGACGGCCGTGTGCCGCGCACCCAGGAAATCGACGGTGCGATCGCCGCGTGGCTCGCCACGCGCACCATCGACGAAGCC
CTTGCCGTGCTGAACGCGGCCGACGTGCCGGTGGGCCGCATCTACAGCGTGGCGGACATGTTCACCGATCCGCAGTTCAT
GGCGCGCCACATGATCCAGCGTTTCAAGTGGCAGGACGGCCGGGAAATCACGCTGCCGTCGGTCACGCCGAAGCTCTCGG
CCACGCCGGGCGAGACGCGCTGGCTGGGCCCGGAACTGGGTGAACATACCGATGAAGTCCTTCAATCACTGGGTTATGAT
GCAGACCACATCGCGAGGTTGCACGCGCAACAAATAGTCTGA

Upstream 100 bases:

>100_bases
ATCGCCCGCGCCATGCTCGATCGCCGCTCGATGTAGCGCGAGGCGCCGGTTTCAACCTGACGCAGCGCAGCGCGCGTCAG
GATCAGAACAAAGGAGACAC

Downstream 100 bases:

>100_bases
GTGTGCGCGCTGCGACAAGACAGAAAAGCCGATAAAAAACGGACAACAAAAGTTTGGAGACTCAAGACCATGCAACGGAG
AAGCTTTCTCGCCGGTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSVTPESGAGAAPQEKTGPLAGVKVLELGTLIAGPFAARFLGEFGADVVKIEDPKGGDPLRKWRKLYPEVGGTSLWWAVQ
ARNKKSVTINLKAEEGKEIVRRLAKEADIVVENFRPGLLEKLGLGYDVLSAENPGLVMVRLSGYGQTGPYRDRPGFGAIA
ESMGGLRHITGYPDLPPPRIGISIGDSIAALHGVIGALMALHHKQVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVR
ERTGASLPGIVPSNTYPCRDGSIVIGGNSDPIFRRLMMAIDREDLANDPTLAHNDGRVPRTQEIDGAIAAWLATRTIDEA
LAVLNAADVPVGRIYSVADMFTDPQFMARHMIQRFKWQDGREITLPSVTPKLSATPGETRWLGPELGEHTDEVLQSLGYD
ADHIARLHAQQIV

Sequences:

>Translated_413_residues
MSVTPESGAGAAPQEKTGPLAGVKVLELGTLIAGPFAARFLGEFGADVVKIEDPKGGDPLRKWRKLYPEVGGTSLWWAVQ
ARNKKSVTINLKAEEGKEIVRRLAKEADIVVENFRPGLLEKLGLGYDVLSAENPGLVMVRLSGYGQTGPYRDRPGFGAIA
ESMGGLRHITGYPDLPPPRIGISIGDSIAALHGVIGALMALHHKQVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVR
ERTGASLPGIVPSNTYPCRDGSIVIGGNSDPIFRRLMMAIDREDLANDPTLAHNDGRVPRTQEIDGAIAAWLATRTIDEA
LAVLNAADVPVGRIYSVADMFTDPQFMARHMIQRFKWQDGREITLPSVTPKLSATPGETRWLGPELGEHTDEVLQSLGYD
ADHIARLHAQQIV
>Mature_412_residues
SVTPESGAGAAPQEKTGPLAGVKVLELGTLIAGPFAARFLGEFGADVVKIEDPKGGDPLRKWRKLYPEVGGTSLWWAVQA
RNKKSVTINLKAEEGKEIVRRLAKEADIVVENFRPGLLEKLGLGYDVLSAENPGLVMVRLSGYGQTGPYRDRPGFGAIAE
SMGGLRHITGYPDLPPPRIGISIGDSIAALHGVIGALMALHHKQVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVRE
RTGASLPGIVPSNTYPCRDGSIVIGGNSDPIFRRLMMAIDREDLANDPTLAHNDGRVPRTQEIDGAIAAWLATRTIDEAL
AVLNAADVPVGRIYSVADMFTDPQFMARHMIQRFKWQDGREITLPSVTPKLSATPGETRWLGPELGEHTDEVLQSLGYDA
DHIARLHAQQIV

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=396, Percent_Identity=31.0606060606061, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI300863124, Length=327, Percent_Identity=33.0275229357798, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI300863126, Length=396, Percent_Identity=29.2929292929293, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI13376042, Length=327, Percent_Identity=28.7461773700306, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI266456254, Length=400, Percent_Identity=27, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI42794625, Length=400, Percent_Identity=27, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI266458393, Length=261, Percent_Identity=30.2681992337165, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI266458397, Length=261, Percent_Identity=30.2681992337165, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI266458395, Length=131, Percent_Identity=38.1679389312977, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI42822893, Length=131, Percent_Identity=38.1679389312977, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI87082093, Length=339, Percent_Identity=33.6283185840708, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1788717, Length=426, Percent_Identity=29.3427230046948, Blast_Score=165, Evalue=5e-42,
Organism=Escherichia coli, GI1786222, Length=413, Percent_Identity=29.2978208232446, Blast_Score=158, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI115535051, Length=341, Percent_Identity=26.3929618768328, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI32564160, Length=281, Percent_Identity=27.7580071174377, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24648431, Length=398, Percent_Identity=33.6683417085427, Blast_Score=231, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24585488, Length=370, Percent_Identity=29.7297297297297, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 44613; Mature: 44481

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTPESGAGAAPQEKTGPLAGVKVLELGTLIAGPFAARFLGEFGADVVKIEDPKGGDPL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHH
RKWRKLYPEVGGTSLWWAVQARNKKSVTINLKAEEGKEIVRRLAKEADIVVENFRPGLLE
HHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KLGLGYDVLSAENPGLVMVRLSGYGQTGPYRDRPGFGAIAESMGGLRHITGYPDLPPPRI
HHCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCE
GISIGDSIAALHGVIGALMALHHKQVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVR
EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHH
ERTGASLPGIVPSNTYPCRDGSIVIGGNSDPIFRRLMMAIDREDLANDPTLAHNDGRVPR
HCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TQEIDGAIAAWLATRTIDEALAVLNAADVPVGRIYSVADMFTDPQFMARHMIQRFKWQDG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
REITLPSVTPKLSATPGETRWLGPELGEHTDEVLQSLGYDADHIARLHAQQIV
CEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SVTPESGAGAAPQEKTGPLAGVKVLELGTLIAGPFAARFLGEFGADVVKIEDPKGGDPL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHH
RKWRKLYPEVGGTSLWWAVQARNKKSVTINLKAEEGKEIVRRLAKEADIVVENFRPGLLE
HHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KLGLGYDVLSAENPGLVMVRLSGYGQTGPYRDRPGFGAIAESMGGLRHITGYPDLPPPRI
HHCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCE
GISIGDSIAALHGVIGALMALHHKQVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVR
EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHH
ERTGASLPGIVPSNTYPCRDGSIVIGGNSDPIFRRLMMAIDREDLANDPTLAHNDGRVPR
HCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TQEIDGAIAAWLATRTIDEALAVLNAADVPVGRIYSVADMFTDPQFMARHMIQRFKWQDG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
REITLPSVTPKLSATPGETRWLGPELGEHTDEVLQSLGYDADHIARLHAQQIV
CEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]