| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ybaB [C]
Identifier: 91783456
GI number: 91783456
Start: 2300186
End: 2300512
Strand: Direct
Name: ybaB [C]
Synonym: Bxe_A2360
Alternate gene names: 91783456
Gene position: 2300186-2300512 (Clockwise)
Preceding gene: 91783455
Following gene: 91783457
Centisome position: 46.98
GC content: 61.77
Gene sequence:
>327_bases ATGATGAAAGGCCAACTCGCCGGGCTGATGAAGCAAGCCCAGCAGATGCAGGAAAACATGAAGAAAATGCAGGAGCAACT CGCACTGATCGAAGTCGAGGGGCAGTCGGGCGCCGGTCTCGTGAAGGTGACGATGACCTGCAAGAACGACGTGCGCCGCG TATCGATCGACCCGAGCCTGCTCGCCGACGACAAGGACATGCTGGAAGACCTCGTCGCCGCCGCGTTCAACGACGCCGTG CGCAAGGCTGAAGCCACCGCCCAGGAAAAAATGGGTGGCATGACCTCGGGCCTGCCGCTGCCGCCGGGCTTCAAGCTGCC GTTCTGA
Upstream 100 bases:
>100_bases GCCGGTTCGAACGGCGCGCCGTCGGTCCACTGATTCGCCGCGCGACACGCCAGAGCGCGCCCGATTTCCGAATTTCACGC TATCAAGAAGGAGCATGTCC
Downstream 100 bases:
>100_bases ACGACGCCGCGACTGTAGTCGCGGCGGCGTGACCGGCACAATGGAACGCGCGAGCCGTACCTCCCGTCAGGGTTGCACGC GCGGCGCGCGTTCCGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MMKGQLAGLMKQAQQMQENMKKMQEQLALIEVEGQSGAGLVKVTMTCKNDVRRVSIDPSLLADDKDMLEDLVAAAFNDAV RKAEATAQEKMGGMTSGLPLPPGFKLPF
Sequences:
>Translated_108_residues MMKGQLAGLMKQAQQMQENMKKMQEQLALIEVEGQSGAGLVKVTMTCKNDVRRVSIDPSLLADDKDMLEDLVAAAFNDAV RKAEATAQEKMGGMTSGLPLPPGFKLPF >Mature_108_residues MMKGQLAGLMKQAQQMQENMKKMQEQLALIEVEGQSGAGLVKVTMTCKNDVRRVSIDPSLLADDKDMLEDLVAAAFNDAV RKAEATAQEKMGGMTSGLPLPPGFKLPF
Specific function: Unknown
COG id: COG0718
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0133 family [H]
Homologues:
Organism=Escherichia coli, GI1786677, Length=106, Percent_Identity=67.9245283018868, Blast_Score=148, Evalue=7e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004401 [H]
Pfam domain/function: PF02575 DUF149 [H]
EC number: NA
Molecular weight: Translated: 11713; Mature: 11713
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 9.3 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 9.3 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKGQLAGLMKQAQQMQENMKKMQEQLALIEVEGQSGAGLVKVTMTCKNDVRRVSIDPSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCEEECCCCHH LADDKDMLEDLVAAAFNDAVRKAEATAQEKMGGMTSGLPLPPGFKLPF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMKGQLAGLMKQAQQMQENMKKMQEQLALIEVEGQSGAGLVKVTMTCKNDVRRVSIDPSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCEEECCCCHH LADDKDMLEDLVAAAFNDAVRKAEATAQEKMGGMTSGLPLPPGFKLPF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA