Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yejB [H]

Identifier: 91782833

GI number: 91782833

Start: 1611296

End: 1612348

Strand: Direct

Name: yejB [H]

Synonym: Bxe_A2992

Alternate gene names: 91782833

Gene position: 1611296-1612348 (Clockwise)

Preceding gene: 91782832

Following gene: 91782834

Centisome position: 32.91

GC content: 60.02

Gene sequence:

>1053_bases
ATGCTCGCCTACATTCTCAGACGATTACTGTTGATGGTGCCGACCCTGCTCGGCGTAGTCACACTGACCTTTGTCGTCAC
GCAGTTCGTGCCGGGTGGGCCGGTCGAACAGGTGATGACGCAACTCCGCCACGGCGCCGGCCGTGGCGGAGAGGCGGGGG
CGGGTGGCGGCGGCTATCACGGCAGCCAGGGCGTCGATCCGCAGCAGATCGAGCAGATCAAGAAGCAGTTCGGCTTCGAC
AAGCCACCGCTCGAACGCTATCTGCTGATGCTCAGGCGCTACGCGACGTTCGATCTCGGCCAGTCCTACTATCAGCACGA
CAGCGTGTGGGACGTCATCAAATCGAAGCTGCCCGTATCGATCACGCTCGGCTTATGGACGGTACTGCTCACCTATCTGA
TATCGGTGCCGTTGGGGATCGCGAAAGCGGTGCGCAACGGCTCGCGTTTCGATACCGTCACGAGCGTGCTGGTACTCGCC
GGCTACGCAATTCCCGGTTTCGTGCTCGGCGTCTTGCTGCTGATGTTATTCGGCGGCGGCACGTTCTGGCAGGTGTTTCC
CATGCGCGGTCTCACATCGGATAACTTCAACGATCTCAGCGCATTCGGCAAGATACTCGACTATCTCTGGCATATCGTGC
TGCCGGTCACGGCTTCGGTGGTCGGCAACTTCGCGATCGTCACGATTCTGACCAAGAACACGTTTCTGGAAGAGATCGGC
CGTCAGTATGTGTTGACGGCACGAGCCAAGGGTGCCCCGGAGCGCGACGTGCTGTGGAAACACGTGCTGCGCAACGCCGC
GATTCCATTGCTCACGGGCTTGCCCGCGGCCTTCGTCGGGGCGTTTCTGAACGGCAATCTGCTGATCGAAACGCTGTTCT
CGCTCGACGGCATGGGCCAACTGTCGTACGACTCGGTGATTCGCCGTGATTATCCGGTCGTGCTCGGATCGCTCTTTCTC
TTCACGCTGATTGCCCTCGTAACCAAACTCATTGCTGACGTCTGCTATGTCCTCGTCGACCCCCGCATCCAATTCAACCG
CCTGGACCGCTGA

Upstream 100 bases:

>100_bases
CGTATCAATACGAAGACTGGGTGATCGATTACTGGTACAACAAGGCGCCTGCCGCCCAGGGCGCATCTTCCACCACGGCT
ACGGCCCACTGAGGCACCGC

Downstream 100 bases:

>100_bases
CGCGGCCGGCGCGGCGCACGCGGCGTCGCCGTCTCCGTGGCGGCGTACGTGGCTGCGCTTCAGGCAGCAGCGTCTGGGCT
ACTGGAGCCTCGTGATCTTC

Product: ABC transporter, inner membrane subunit

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYHGSQGVDPQQIEQIKKQFGFD
KPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVSITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLA
GYAIPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL
FTLIALVTKLIADVCYVLVDPRIQFNRLDR

Sequences:

>Translated_350_residues
MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYHGSQGVDPQQIEQIKKQFGFD
KPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVSITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLA
GYAIPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL
FTLIALVTKLIADVCYVLVDPRIQFNRLDR
>Mature_350_residues
MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYHGSQGVDPQQIEQIKKQFGFD
KPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVSITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLA
GYAIPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL
FTLIALVTKLIADVCYVLVDPRIQFNRLDR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=50, Blast_Score=379, Evalue=1e-106,
Organism=Escherichia coli, GI1789965, Length=363, Percent_Identity=31.9559228650138, Blast_Score=185, Evalue=5e-48,
Organism=Escherichia coli, GI1787497, Length=346, Percent_Identity=28.9017341040462, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1787053, Length=346, Percent_Identity=29.1907514450867, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789888, Length=345, Percent_Identity=26.0869565217391, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1787761, Length=351, Percent_Identity=26.7806267806268, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1787550, Length=264, Percent_Identity=22.3484848484848, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38538; Mature: 38538

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
GSQGVDPQQIEQIKKQFGFDKPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVS
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLAGYAIPGFVLGVLLLMLFGGG
EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHC
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQ
HHHEEHHHCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCC
LSYDSVIRRDYPVVLGSLFLFTLIALVTKLIADVCYVLVDPRIQFNRLDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
GSQGVDPQQIEQIKKQFGFDKPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVS
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLAGYAIPGFVLGVLLLMLFGGG
EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHC
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQ
HHHEEHHHCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCC
LSYDSVIRRDYPVVLGSLFLFTLIALVTKLIADVCYVLVDPRIQFNRLDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]