| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782234
Identifier: 91782234
GI number: 91782234
Start: 953953
End: 955146
Strand: Direct
Name: 91782234
Synonym: Bxe_A3601
Alternate gene names: NA
Gene position: 953953-955146 (Clockwise)
Preceding gene: 91782233
Following gene: 91782235
Centisome position: 19.48
GC content: 62.81
Gene sequence:
>1194_bases GTGAACGGCAACGTGGCTGTCATGGGGGCGAGCGCGATCCCGATCGGGCGACACCAGTCGGATCCGAACGGGCCGTTACA GACGCTCGAACACGAGATCCTCGCGAAGCTGGTGGTTCAGGCTGCGCGCGATGCACACATCGAGAAGGATGACATCGGCG GTCTCGTGTTCACCTCGCCGAGGACCTACACGCGGCAAAAATATCTGCATACATTCATGGCCAATTACTTGCGGTTGCCG TGCGACGGCACCGTCATGGAAGTGATGGGGAACGGCATGACGGCCGCGCTCGCGTTCGACGAAGCGGCGAACCAGATCAG GCTCGGGCGGGCGAAAGTCGTGCTGGCGCTCGGGATCAACATGGAGTCGGCGATCTCGTCTACCGAGCATGCAATGAGCA GCATGCGTGCGACGGGCGACATCGATTTTCACGCCACCGCCGGATTCATTCCTATCTCCTGGTATGCGATGGATGCCACG CGGTACATGTATCAATACGGCGCGACGCGTGAGCAGATTGCGTCTGTGGCCGTCAAGAACCGGTATCACGCTTCGCTCAA TCCGCTCGCGCAATACCGTAAGCCCATTTCTCTCGAAGACGTGCTCGCGCAGCGTCCGATCGTTGAGCCGCTCGGGCTCT ACGAAGTTCCTCCACGGGGGGACGGCGCGGCCTGCATCGTACTAGCTTCGGAAGAGGTGGCGAGGAGCACGGGTCGGCCC TACGCGCTGCTGCGCGGCCGCGGCTTCCATCACGAGGGGGCGCATCAGATCAGCGAGGTGCCGAACGACATGATCGAGTT CAACGCGGCCGTGCGAGCCGGCGCTGCAGCCTATCGCGAGGCGGGCATCGAGGCGCGCGATATCGACATCGCCGAGGTCT ACGCGCCGTGCACGATCGTCGAGGTGATCGTGAGCGAAGCGCTCGGTTTCTTCGCTCGCGGCGAAGGCGCGGCGGCCGCG GCGGCGAAAGAAACGACGCTTGGCGGTCGTATTCCGATTTCGACCTCGGGCGGTCTCACATCGCGCGGACATCCCGCTCT GGTGACCTCACTCTATAACGTTGTCGAACTGGTCGATCAGTTGCTGAACCGTGCAGGCGAACGGCAAGTCACAGACGCCC GCTGGGGACTGACAACTGGCGAACTCGGCAACTACAACGCGGCGCTCGTTCACGTGCTGGAGGCGATCCGATGA
Upstream 100 bases:
>100_bases CCGGTTCCGCCGCGCTATCAGGCGACGCAGGCGCAAACCGGTCTCACGCAATGACGCCGGCGACAACGCCGAAATATTCA TCCGGAACAGGAGTCGATTT
Downstream 100 bases:
>100_bases ACCTCACTACCATTTTGATGCCGCGCGAGCGGGCATATCCGCCGCGTGTCTCGGCATTTACGGAGCCGTACTGGAAGGCT CTGTCGGACGGTCGTCTGAT
Product: hypothetical protein
Products: CoA; 3-oxoacyl-CoA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNGNVAVMGASAIPIGRHQSDPNGPLQTLEHEILAKLVVQAARDAHIEKDDIGGLVFTSPRTYTRQKYLHTFMANYLRLP CDGTVMEVMGNGMTAALAFDEAANQIRLGRAKVVLALGINMESAISSTEHAMSSMRATGDIDFHATAGFIPISWYAMDAT RYMYQYGATREQIASVAVKNRYHASLNPLAQYRKPISLEDVLAQRPIVEPLGLYEVPPRGDGAACIVLASEEVARSTGRP YALLRGRGFHHEGAHQISEVPNDMIEFNAAVRAGAAAYREAGIEARDIDIAEVYAPCTIVEVIVSEALGFFARGEGAAAA AAKETTLGGRIPISTSGGLTSRGHPALVTSLYNVVELVDQLLNRAGERQVTDARWGLTTGELGNYNAALVHVLEAIR
Sequences:
>Translated_397_residues MNGNVAVMGASAIPIGRHQSDPNGPLQTLEHEILAKLVVQAARDAHIEKDDIGGLVFTSPRTYTRQKYLHTFMANYLRLP CDGTVMEVMGNGMTAALAFDEAANQIRLGRAKVVLALGINMESAISSTEHAMSSMRATGDIDFHATAGFIPISWYAMDAT RYMYQYGATREQIASVAVKNRYHASLNPLAQYRKPISLEDVLAQRPIVEPLGLYEVPPRGDGAACIVLASEEVARSTGRP YALLRGRGFHHEGAHQISEVPNDMIEFNAAVRAGAAAYREAGIEARDIDIAEVYAPCTIVEVIVSEALGFFARGEGAAAA AAKETTLGGRIPISTSGGLTSRGHPALVTSLYNVVELVDQLLNRAGERQVTDARWGLTTGELGNYNAALVHVLEAIR >Mature_397_residues MNGNVAVMGASAIPIGRHQSDPNGPLQTLEHEILAKLVVQAARDAHIEKDDIGGLVFTSPRTYTRQKYLHTFMANYLRLP CDGTVMEVMGNGMTAALAFDEAANQIRLGRAKVVLALGINMESAISSTEHAMSSMRATGDIDFHATAGFIPISWYAMDAT RYMYQYGATREQIASVAVKNRYHASLNPLAQYRKPISLEDVLAQRPIVEPLGLYEVPPRGDGAACIVLASEEVARSTGRP YALLRGRGFHHEGAHQISEVPNDMIEFNAAVRAGAAAYREAGIEARDIDIAEVYAPCTIVEVIVSEALGFFARGEGAAAA AAKETTLGGRIPISTSGGLTSRGHPALVTSLYNVVELVDQLLNRAGERQVTDARWGLTTGELGNYNAALVHVLEAIR
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI302344767, Length=307, Percent_Identity=28.0130293159609, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI302344760, Length=307, Percent_Identity=28.0130293159609, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI19923233, Length=307, Percent_Identity=28.0130293159609, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI302344762, Length=294, Percent_Identity=28.2312925170068, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI55956775, Length=262, Percent_Identity=26.7175572519084, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17537653, Length=224, Percent_Identity=31.6964285714286, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24585051, Length=312, Percent_Identity=28.2051282051282, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI19921506, Length=312, Percent_Identity=27.5641025641026, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: 2.3.1.16
Molecular weight: Translated: 42714; Mature: 42714
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGNVAVMGASAIPIGRHQSDPNGPLQTLEHEILAKLVVQAARDAHIEKDDIGGLVFTSP CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECC RTYTRQKYLHTFMANYLRLPCDGTVMEVMGNGMTAALAFDEAANQIRLGRAKVVLALGIN CHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEHHHHHHHEECCCEEEEEEECCC MESAISSTEHAMSSMRATGDIDFHATAGFIPISWYAMDATRYMYQYGATREQIASVAVKN HHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHC RYHASLNPLAQYRKPISLEDVLAQRPIVEPLGLYEVPPRGDGAACIVLASEEVARSTGRP CCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCCCCCCEEEEEECHHHHHHCCCC YALLRGRGFHHEGAHQISEVPNDMIEFNAAVRAGAAAYREAGIEARDIDIAEVYAPCTIV EEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH EVIVSEALGFFARGEGAAAAAAKETTLGGRIPISTSGGLTSRGHPALVTSLYNVVELVDQ HHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH LLNRAGERQVTDARWGLTTGELGNYNAALVHVLEAIR HHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MNGNVAVMGASAIPIGRHQSDPNGPLQTLEHEILAKLVVQAARDAHIEKDDIGGLVFTSP CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECC RTYTRQKYLHTFMANYLRLPCDGTVMEVMGNGMTAALAFDEAANQIRLGRAKVVLALGIN CHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEHHHHHHHEECCCEEEEEEECCC MESAISSTEHAMSSMRATGDIDFHATAGFIPISWYAMDATRYMYQYGATREQIASVAVKN HHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHC RYHASLNPLAQYRKPISLEDVLAQRPIVEPLGLYEVPPRGDGAACIVLASEEVARSTGRP CCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCCCCCCEEEEEECHHHHHHCCCC YALLRGRGFHHEGAHQISEVPNDMIEFNAAVRAGAAAYREAGIEARDIDIAEVYAPCTIV EEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH EVIVSEALGFFARGEGAAAAAAKETTLGGRIPISTSGGLTSRGHPALVTSLYNVVELVDQ HHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH LLNRAGERQVTDARWGLTTGELGNYNAALVHVLEAIR HHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acetyl-CoA
Specific reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]