Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91782235

Identifier: 91782235

GI number: 91782235

Start: 955143

End: 955565

Strand: Direct

Name: 91782235

Synonym: Bxe_A3600

Alternate gene names: NA

Gene position: 955143-955565 (Clockwise)

Preceding gene: 91782234

Following gene: 91782236

Centisome position: 19.51

GC content: 63.83

Gene sequence:

>423_bases
ATGAACCTCACTACCATTTTGATGCCGCGCGAGCGGGCATATCCGCCGCGTGTCTCGGCATTTACGGAGCCGTACTGGAA
GGCTCTGTCGGACGGTCGTCTGATCACCACATTCTGCACGCGCTGCAGTAAGCCGACATTTGTGCCGAAACCGGTCTGCC
CACATTGCTGGAGCGACGACATGCGTTGGGCGGATCTGTGCACGACCGGCACCCTGTACTCGTGGACGCGCGTGTATTCC
GCGCCGAGCGCCTTCGTGGAGGAAGCGCCGTTCACGCTCGGAATCGTTGATCTGGATGTGGGGTTGCGACTGGCGTGCCG
TCTGCACGGCGCGGAGCATCAGGACGTCGCGCCCGGCATGCCGGTCCGGATGGCGGCGTTGAGCTATCTCGACGGTCCCA
TGCTGGCCGCGGTGCCGAGGTGA

Upstream 100 bases:

>100_bases
GTGCAGGCGAACGGCAAGTCACAGACGCCCGCTGGGGACTGACAACTGGCGAACTCGGCAACTACAACGCGGCGCTCGTT
CACGTGCTGGAGGCGATCCG

Downstream 100 bases:

>100_bases
TGCGCGAGTCGCACGGCTGGCAACGGAAACGTCACACACCGGGCGAGAGCCGATTGCCTGCGAGATTCAATTCAAACTGG
AGACTGTCATGGGACACATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDDMRWADLCTTGTLYSWTRVYS
APSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGMPVRMAALSYLDGPMLAAVPR

Sequences:

>Translated_140_residues
MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDDMRWADLCTTGTLYSWTRVYS
APSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGMPVRMAALSYLDGPMLAAVPR
>Mature_140_residues
MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDDMRWADLCTTGTLYSWTRVYS
APSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGMPVRMAALSYLDGPMLAAVPR

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15622; Mature: 15622

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDD
CCCEEEEECCCCCCCCCCCHHCCHHHHHHCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCC
MRWADLCTTGTLYSWTRVYSAPSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGM
CCHHHHHCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCC
PVRMAALSYLDGPMLAAVPR
CHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDD
CCCEEEEECCCCCCCCCCCHHCCHHHHHHCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCC
MRWADLCTTGTLYSWTRVYSAPSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGM
CCHHHHHCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCC
PVRMAALSYLDGPMLAAVPR
CHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA