| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782235
Identifier: 91782235
GI number: 91782235
Start: 955143
End: 955565
Strand: Direct
Name: 91782235
Synonym: Bxe_A3600
Alternate gene names: NA
Gene position: 955143-955565 (Clockwise)
Preceding gene: 91782234
Following gene: 91782236
Centisome position: 19.51
GC content: 63.83
Gene sequence:
>423_bases ATGAACCTCACTACCATTTTGATGCCGCGCGAGCGGGCATATCCGCCGCGTGTCTCGGCATTTACGGAGCCGTACTGGAA GGCTCTGTCGGACGGTCGTCTGATCACCACATTCTGCACGCGCTGCAGTAAGCCGACATTTGTGCCGAAACCGGTCTGCC CACATTGCTGGAGCGACGACATGCGTTGGGCGGATCTGTGCACGACCGGCACCCTGTACTCGTGGACGCGCGTGTATTCC GCGCCGAGCGCCTTCGTGGAGGAAGCGCCGTTCACGCTCGGAATCGTTGATCTGGATGTGGGGTTGCGACTGGCGTGCCG TCTGCACGGCGCGGAGCATCAGGACGTCGCGCCCGGCATGCCGGTCCGGATGGCGGCGTTGAGCTATCTCGACGGTCCCA TGCTGGCCGCGGTGCCGAGGTGA
Upstream 100 bases:
>100_bases GTGCAGGCGAACGGCAAGTCACAGACGCCCGCTGGGGACTGACAACTGGCGAACTCGGCAACTACAACGCGGCGCTCGTT CACGTGCTGGAGGCGATCCG
Downstream 100 bases:
>100_bases TGCGCGAGTCGCACGGCTGGCAACGGAAACGTCACACACCGGGCGAGAGCCGATTGCCTGCGAGATTCAATTCAAACTGG AGACTGTCATGGGACACATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDDMRWADLCTTGTLYSWTRVYS APSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGMPVRMAALSYLDGPMLAAVPR
Sequences:
>Translated_140_residues MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDDMRWADLCTTGTLYSWTRVYS APSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGMPVRMAALSYLDGPMLAAVPR >Mature_140_residues MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDDMRWADLCTTGTLYSWTRVYS APSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGMPVRMAALSYLDGPMLAAVPR
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15622; Mature: 15622
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDD CCCEEEEECCCCCCCCCCCHHCCHHHHHHCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCC MRWADLCTTGTLYSWTRVYSAPSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGM CCHHHHHCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCC PVRMAALSYLDGPMLAAVPR CHHHHHHHHCCCCEEEECCC >Mature Secondary Structure MNLTTILMPRERAYPPRVSAFTEPYWKALSDGRLITTFCTRCSKPTFVPKPVCPHCWSDD CCCEEEEECCCCCCCCCCCHHCCHHHHHHCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCC MRWADLCTTGTLYSWTRVYSAPSAFVEEAPFTLGIVDLDVGLRLACRLHGAEHQDVAPGM CCHHHHHCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCC PVRMAALSYLDGPMLAAVPR CHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA