| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781924
Identifier: 91781924
GI number: 91781924
Start: 609589
End: 610632
Strand: Reverse
Name: 91781924
Synonym: Bxe_A3919
Alternate gene names: NA
Gene position: 610632-609589 (Counterclockwise)
Preceding gene: 91781925
Following gene: 91781923
Centisome position: 12.47
GC content: 66.0
Gene sequence:
>1044_bases ATGATCCGCAAGAATTCCGAATACCCGCTCCAGCCACCGCGTGAACGCGGCACCGGGCGAGCCTTTGTGTTCGCTCTCGT GATGCACGCGCTGCTCGGGTTCTTCCTGTATCACGGCATTCAGTGGCAAAACAGTACGCCCGAAGGCGCGGAAGCGGAGC TGTGGACCGAAGTGCCGGATACGTCGATCCCGCGCCCGGTTCCGCCGCCGGTACCGGTGCCGGTGGCTCCTGCTCCGCCG ATGCGGGACGAACAGGCCGACATCGCGCTGCAGGAAAAGAAGCGTCAGCAACAGGAAGCGGCTCGCGAGGCTCAGTTGGC CGAACAGCAGCGTCAGCAGAAACTGCAGGCCCAGCAGGAAGCCGAGGCGAAGCGTCAGCAGCAACTGGCCGCGGACCAGG CCGCGCAGAAGGCCGCGGCGGCCAGACAGAAACAGCTACAGCTACAGCAGCAGCAACAGCAACAGCAACAGCAGCAGGAG GCCAGCAAGCTGAAGCAACAGCAATTGGCCGAGCAGCAAAAGCAGCAGCAGTTGAAAGAACAGCAGCAGGAACAGCAACA GAAGCAGGCCGAGGCTGAGGCGCAGAAGAAGGCCGACGCGCAGAAAGCCGCGAAGGCCAAGGCGCAGGCGGACGCCGCGG CGCAAGCGAAGAAACTGGATGCGGAGCGCCGCGCGCGGCTCGCGCAGATGCAGGGTCTCGCCGCCACCGGCACCGGCTCG ACCACGAGCGATGGGCTCGGAAAGAGCGGCACGGGCAGCGGCTCGGGTGGCACGGCGACGTCGCCGGGTTACTCCGACAA GGTGCGTCGTGCGGTGCGCCCGAATATCACCTGGGGCGGTGAAACGAGCGGCCTGGAGACAGTGGTCTCCGTGCGTTGCT CGCCGACCGGCACCTTGCTTGGCGCAACGATTTCGCGCAGCAGCGGCAACCCGGCGTGGGACGACGCGGCGCTGCGGGCC GTCCAGCGTACCGATCCGATGCCTCAGGACATCAATGGCAAGACCCCGACCAGCTTCCTGATTACGTTGCGCCCGGCCGG TTGA
Upstream 100 bases:
>100_bases TCGCCGCCGACAAAACGGTCAAGTACGAAGTCGTGATGAATGTGATGTCCGAACTGAAAGCTCGCGGCGTCAAGCGCGTT GGATTGCTCGTCAAATCGCA
Downstream 100 bases:
>100_bases TTCCAGTAGTTGACAGTCAGTTGACAGCAGACACGGCGCCCCGCCCACCAGGGCGCGCTCGGGAACGAATTAGTTCTTTT CGGGTCTGTCTGCTGTCTTG
Product: TonB protein
Products: NA
Alternate protein names: NB-Like; NB C-Terminal; LA-Related Transport Transmembrane Protein; NB Family Protein; Membrane Spanning Protein In lA-TolQ-TolR Complex; LA Family Protein; LA Protein; NB Protein; Protein la; NB-Like Protein; TOLA-Like Transport Transmembrane Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MIRKNSEYPLQPPRERGTGRAFVFALVMHALLGFFLYHGIQWQNSTPEGAEAELWTEVPDTSIPRPVPPPVPVPVAPAPP MRDEQADIALQEKKRQQQEAAREAQLAEQQRQQKLQAQQEAEAKRQQQLAADQAAQKAAAARQKQLQLQQQQQQQQQQQE ASKLKQQQLAEQQKQQQLKEQQQEQQQKQAEAEAQKKADAQKAAKAKAQADAAAQAKKLDAERRARLAQMQGLAATGTGS TTSDGLGKSGTGSGSGGTATSPGYSDKVRRAVRPNITWGGETSGLETVVSVRCSPTGTLLGATISRSSGNPAWDDAALRA VQRTDPMPQDINGKTPTSFLITLRPAG
Sequences:
>Translated_347_residues MIRKNSEYPLQPPRERGTGRAFVFALVMHALLGFFLYHGIQWQNSTPEGAEAELWTEVPDTSIPRPVPPPVPVPVAPAPP MRDEQADIALQEKKRQQQEAAREAQLAEQQRQQKLQAQQEAEAKRQQQLAADQAAQKAAAARQKQLQLQQQQQQQQQQQE ASKLKQQQLAEQQKQQQLKEQQQEQQQKQAEAEAQKKADAQKAAKAKAQADAAAQAKKLDAERRARLAQMQGLAATGTGS TTSDGLGKSGTGSGSGGTATSPGYSDKVRRAVRPNITWGGETSGLETVVSVRCSPTGTLLGATISRSSGNPAWDDAALRA VQRTDPMPQDINGKTPTSFLITLRPAG >Mature_347_residues MIRKNSEYPLQPPRERGTGRAFVFALVMHALLGFFLYHGIQWQNSTPEGAEAELWTEVPDTSIPRPVPPPVPVPVAPAPP MRDEQADIALQEKKRQQQEAAREAQLAEQQRQQKLQAQQEAEAKRQQQLAADQAAQKAAAARQKQLQLQQQQQQQQQQQE ASKLKQQQLAEQQKQQQLKEQQQEQQQKQAEAEAQKKADAQKAAKAKAQADAAAQAKKLDAERRARLAQMQGLAATGTGS TTSDGLGKSGTGSGSGGTATSPGYSDKVRRAVRPNITWGGETSGLETVVSVRCSPTGTLLGATISRSSGNPAWDDAALRA VQRTDPMPQDINGKTPTSFLITLRPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37701; Mature: 37701
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKNSEYPLQPPRERGTGRAFVFALVMHALLGFFLYHGIQWQNSTPEGAEAELWTEVPD CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC TSIPRPVPPPVPVPVAPAPPMRDEQADIALQEKKRQQQEAAREAQLAEQQRQQKLQAQQE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAKRQQQLAADQAAQKAAAARQKQLQLQQQQQQQQQQQEASKLKQQQLAEQQKQQQLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQEQQQKQAEAEAQKKADAQKAAKAKAQADAAAQAKKLDAERRARLAQMQGLAATGTGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCC TTSDGLGKSGTGSGSGGTATSPGYSDKVRRAVRPNITWGGETSGLETVVSVRCSPTGTLL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHEECCCCCCHH GATISRSSGNPAWDDAALRAVQRTDPMPQDINGKTPTSFLITLRPAG HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MIRKNSEYPLQPPRERGTGRAFVFALVMHALLGFFLYHGIQWQNSTPEGAEAELWTEVPD CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC TSIPRPVPPPVPVPVAPAPPMRDEQADIALQEKKRQQQEAAREAQLAEQQRQQKLQAQQE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAKRQQQLAADQAAQKAAAARQKQLQLQQQQQQQQQQQEASKLKQQQLAEQQKQQQLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQEQQQKQAEAEAQKKADAQKAAKAKAQADAAAQAKKLDAERRARLAQMQGLAATGTGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCC TTSDGLGKSGTGSGSGGTATSPGYSDKVRRAVRPNITWGGETSGLETVVSVRCSPTGTLL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHEECCCCCCHH GATISRSSGNPAWDDAALRAVQRTDPMPQDINGKTPTSFLITLRPAG HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA