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The map label for this gene is tolB [H]

Identifier: 91781923

GI number: 91781923

Start: 608158

End: 609450

Strand: Reverse

Name: tolB [H]

Synonym: Bxe_A3920

Alternate gene names: 91781923

Gene position: 609450-608158 (Counterclockwise)

Preceding gene: 91781924

Following gene: 91781922

Centisome position: 12.45

GC content: 63.42

Gene sequence:

>1293_bases
ATGAGTTTGATGACCAAGCTAGGCCTGCGGACACTTGTAGCGTCGTGCCTGATCGCCGTCGGCGGTGCCGCCAACGCACA
ACTCAACGTCCTCGTGACGGGCGTCGGGTCCACCCAGTTTCCGATCGCAACGGCGAATTTTGCCAATGAAGCGAACTCGC
CGCAGCAGGTCAGCACGATCGTGCGTCAGGATCTGCAACGCAGCGGCAAATTCACGAACATCGACGCGGGCGCCACGCCG
GTGTCCGAAACGGATTCCGTCGACCTCGGCAGCTGGAAGGCCAAGGGCGCCAACGCATTCGTGTCGGGCAGCGTGAACCG
CCTGCCGAACGGCCAGTATGAAGTGCGCTTCAAGCTGTACGACACCGTCAAGGGCGAGAGCCTCGGCGGCCTCGTGCTGG
TGAGCCCGGAAAGCGGCTTGCGCATGAGCGCGCACAAGGTCGCGGACTATATCTACGCGAAGCTGATGGGTGGCCGCGGC
GTGTTCGCCACGCGCCTGTCGTACGTCATCAAGACGGGCGGCCGTTATCAGTTGCAGATCTCCGATTCGGACGGCCAGGA
CGCGCACATCGCGCTGTCGAGCCCCGAGCCGATCATCTCGCCGGCATGGTCGCCTGACGGCACCAAGGTCGCTTACGTTT
CGTTCGAAAAGAAGAAGCCGATCGTTTATATCCACGATCTGCCCACGGGGCGCCGCATCGTGGTGTCGGACCAGAAAGGC
AACAACAGCGCGCCGGCCTGGTCGCCGGACGGACGCACGCTGGCGGTCGCACTCTCGCGCACCGGCAACACACAGATTTT
CGCCGTCAATGCAGACGGCAGCGGCCTGCGGCGTCTCACGCAAGGCAGCTCGATCGACACCGAACCGTGTTTCTCGCCTG
ACGGCCAGTCGATCTATTTCACCAGCGACCGTGGCGGCCAGCCGCAAATCTACAAGATGTCGGCCCAGGGCGAAAACGCC
GGCGCCGCACAGCGCGTCACGTTCACGGGCAGCTACAACACCAGCCCGCGCGTGAGCCCGGACGGCAAGCAGCTCGCTTA
TATCTCGCGCGTCGGCGGCGGGTTCAAGCTTTATATCCAGGACCTGCAGGGTAACACCGCCACAGGCCTGACGGACACGA
CACATGACGAATCGCCGAGCTTCGCGGCGAACGGTCAGTACATTCTTTACGCCACACAGGTGAACGGCCGTGGCGTGTTG
GCCGCAGTATCGACCGACGGTCGCACTCGGCAGGTCCTGTCCGTTCAGGGTGGCAGCGTACGCGAGCCGTCCTGGGGCCC
GTTTATGCAATAA

Upstream 100 bases:

>100_bases
CCCCGCCCACCAGGGCGCGCTCGGGAACGAATTAGTTCTTTTCGGGTCTGTCTGCTGTCTTGAAGCGTTAGTAAAACCGT
TTTTGGGGAATCCATACAGC

Downstream 100 bases:

>100_bases
CGTTGATGCAATAACACAAGGAGAGTAACCAAATGATGTCAAAACTTCGCTTTGCTTTTGCTGTATTGATGGTCGGTGCG
CTGGCCGCGTGCCACTCGGG

Product: translocation protein TolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSLMTKLGLRTLVASCLIAVGGAANAQLNVLVTGVGSTQFPIATANFANEANSPQQVSTIVRQDLQRSGKFTNIDAGATP
VSETDSVDLGSWKAKGANAFVSGSVNRLPNGQYEVRFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRG
VFATRLSYVIKTGGRYQLQISDSDGQDAHIALSSPEPIISPAWSPDGTKVAYVSFEKKKPIVYIHDLPTGRRIVVSDQKG
NNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEPCFSPDGQSIYFTSDRGGQPQIYKMSAQGENA
GAAQRVTFTGSYNTSPRVSPDGKQLAYISRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGRGVL
AAVSTDGRTRQVLSVQGGSVREPSWGPFMQ

Sequences:

>Translated_430_residues
MSLMTKLGLRTLVASCLIAVGGAANAQLNVLVTGVGSTQFPIATANFANEANSPQQVSTIVRQDLQRSGKFTNIDAGATP
VSETDSVDLGSWKAKGANAFVSGSVNRLPNGQYEVRFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRG
VFATRLSYVIKTGGRYQLQISDSDGQDAHIALSSPEPIISPAWSPDGTKVAYVSFEKKKPIVYIHDLPTGRRIVVSDQKG
NNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEPCFSPDGQSIYFTSDRGGQPQIYKMSAQGENA
GAAQRVTFTGSYNTSPRVSPDGKQLAYISRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGRGVL
AAVSTDGRTRQVLSVQGGSVREPSWGPFMQ
>Mature_429_residues
SLMTKLGLRTLVASCLIAVGGAANAQLNVLVTGVGSTQFPIATANFANEANSPQQVSTIVRQDLQRSGKFTNIDAGATPV
SETDSVDLGSWKAKGANAFVSGSVNRLPNGQYEVRFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGV
FATRLSYVIKTGGRYQLQISDSDGQDAHIALSSPEPIISPAWSPDGTKVAYVSFEKKKPIVYIHDLPTGRRIVVSDQKGN
NSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEPCFSPDGQSIYFTSDRGGQPQIYKMSAQGENAG
AAQRVTFTGSYNTSPRVSPDGKQLAYISRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGRGVLA
AVSTDGRTRQVLSVQGGSVREPSWGPFMQ

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

Organism=Escherichia coli, GI1786961, Length=438, Percent_Identity=36.986301369863, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 45580; Mature: 45448

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMTKLGLRTLVASCLIAVGGAANAQLNVLVTGVGSTQFPIATANFANEANSPQQVSTI
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHH
VRQDLQRSGKFTNIDAGATPVSETDSVDLGSWKAKGANAFVSGSVNRLPNGQYEVRFKLY
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCEEEEEEEE
DTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGGRYQLQI
EECCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCEEEEEE
SDSDGQDAHIALSSPEPIISPAWSPDGTKVAYVSFEKKKPIVYIHDLPTGRRIVVSDQKG
ECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEECCCC
NNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEPCFSPDGQSIYF
CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEEE
TSDRGGQPQIYKMSAQGENAGAAQRVTFTGSYNTSPRVSPDGKQLAYISRVGGGFKLYIQ
ECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEE
DLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGRGVLAAVSTDGRTRQVLSVQGGSV
ECCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCC
REPSWGPFMQ
CCCCCCCCCC
>Mature Secondary Structure 
SLMTKLGLRTLVASCLIAVGGAANAQLNVLVTGVGSTQFPIATANFANEANSPQQVSTI
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHH
VRQDLQRSGKFTNIDAGATPVSETDSVDLGSWKAKGANAFVSGSVNRLPNGQYEVRFKLY
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCEEEEEEEE
DTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGGRYQLQI
EECCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCEEEEEE
SDSDGQDAHIALSSPEPIISPAWSPDGTKVAYVSFEKKKPIVYIHDLPTGRRIVVSDQKG
ECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEECCCC
NNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEPCFSPDGQSIYF
CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEEE
TSDRGGQPQIYKMSAQGENAGAAQRVTFTGSYNTSPRVSPDGKQLAYISRVGGGFKLYIQ
ECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEE
DLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGRGVLAAVSTDGRTRQVLSVQGGSV
ECCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCC
REPSWGPFMQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA