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The map label for this gene is tolR [H]

Identifier: 91781925

GI number: 91781925

Start: 610629

End: 611075

Strand: Reverse

Name: tolR [H]

Synonym: Bxe_A3918

Alternate gene names: 91781925

Gene position: 611075-610629 (Counterclockwise)

Preceding gene: 91781926

Following gene: 91781924

Centisome position: 12.48

GC content: 60.63

Gene sequence:

>447_bases
ATGGCAGGCTCTCGTTCCTCCAGCATGCGCGGCAGCCGCTCGCGCCGCGCGATGGCCGACATCAACGTCGTGCCGTATAT
CGACGTGATGCTCGTGCTGCTCGTGATCTTCATGGTGACCGCGCCGCTCGTTGCTCCGTCGATCGTCAATCTGCCGACCG
TCGGTGGCGCAGCGCCGCAGCAGCAAACGCCGCCCGTCATCGTGAACATTCGCGCGGACGGCAACATGAGCGTCAAATAC
AAGGACGATTCGGGTGCGCAGCAGCAGGAAGACATGACCAAGGCCGATCTGAACAGCTTCATCGCCGAGCGCGCGCAATC
GCATCCTGATCAGCCCGTCGTGATCGCCGCCGACAAAACGGTCAAGTACGAAGTCGTGATGAATGTGATGTCCGAACTGA
AAGCTCGCGGCGTCAAGCGCGTTGGATTGCTCGTCAAATCGCAATGA

Upstream 100 bases:

>100_bases
CGCTACGCGCACGACATCGACCGTCTGGCGATCCGCTTCGAGACCTTCATCGAAGAATTCTCGAACATCCTGCAGCGCCA
GGCACAGTAAGGAGTCCACG

Downstream 100 bases:

>100_bases
TCCGCAAGAATTCCGAATACCCGCTCCAGCCACCGCGTGAACGCGGCACCGGGCGAGCCTTTGTGTTCGCTCTCGTGATG
CACGCGCTGCTCGGGTTCTT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAGSRSSSMRGSRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGGAAPQQQTPPVIVNIRADGNMSVKY
KDDSGAQQQEDMTKADLNSFIAERAQSHPDQPVVIAADKTVKYEVVMNVMSELKARGVKRVGLLVKSQ

Sequences:

>Translated_148_residues
MAGSRSSSMRGSRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGGAAPQQQTPPVIVNIRADGNMSVKY
KDDSGAQQQEDMTKADLNSFIAERAQSHPDQPVVIAADKTVKYEVVMNVMSELKARGVKRVGLLVKSQ
>Mature_147_residues
AGSRSSSMRGSRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGGAAPQQQTPPVIVNIRADGNMSVKYK
DDSGAQQQEDMTKADLNSFIAERAQSHPDQPVVIAADKTVKYEVVMNVMSELKARGVKRVGLLVKSQ

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=128, Percent_Identity=39.0625, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15981; Mature: 15850

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSRSSSMRGSRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGGAAPQ
CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
QQTPPVIVNIRADGNMSVKYKDDSGAQQQEDMTKADLNSFIAERAQSHPDQPVVIAADKT
CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
VKYEVVMNVMSELKARGVKRVGLLVKSQ
CHHHHHHHHHHHHHHCCHHHHHEEEECC
>Mature Secondary Structure 
AGSRSSSMRGSRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGGAAPQ
CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
QQTPPVIVNIRADGNMSVKYKDDSGAQQQEDMTKADLNSFIAERAQSHPDQPVVIAADKT
CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
VKYEVVMNVMSELKARGVKRVGLLVKSQ
CHHHHHHHHHHHHHHCCHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]