Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is fdx [H]

Identifier: 91781709

GI number: 91781709

Start: 360188

End: 360445

Strand: Direct

Name: fdx [H]

Synonym: Bxe_A4137

Alternate gene names: 91781709

Gene position: 360188-360445 (Clockwise)

Preceding gene: 91781708

Following gene: 91781717

Centisome position: 7.36

GC content: 59.3

Gene sequence:

>258_bases
ATGGCCTTGATGATTACCGACGAGTGCATCAATTGCGACGTCTGCGAGCCCGAGTGCCCGAACGACGCGATTTCGATGGG
CCCGGAAATCTATGTGATCGACCCGAAGAAGTGTACCGAGTGCGTCGGGCATTTCGACGAGCCGCAATGTATTCAGGTGT
GCCCGGTCGAGTGTATCCCGCGCGATCCGGAGCATCTGGAGACGCCCGGCGAGTTGATGGCGAAGTACCACGCGCTACAG
GCTGCAAAGGGCGAGTGA

Upstream 100 bases:

>100_bases
GGATCCGGCCAACGGTGCTTCGGCGGCGCAACCGTAACCGGCGTAAACTGTCGGTTTGACGGATCAAAGTCGGCTGCGGC
CGGCGTGAAGTGAGAGAAGC

Downstream 100 bases:

>100_bases
AGTTCGAAGTCTAAAAAAACGGCGAGACCTTTCGGCCTCGCCGTTTTTTTTTGCCGCAACGTTTCTGCGCTGTTCGTCGT
GTTAACCGACGTAAGCGCTG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIPRDPEHLETPGELMAKYHALQ
AAKGE

Sequences:

>Translated_85_residues
MALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIPRDPEHLETPGELMAKYHALQ
AAKGE
>Mature_84_residues
ALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIPRDPEHLETPGELMAKYHALQA
AKGE

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=83, Percent_Identity=56.6265060240964, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9408; Mature: 9277

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
15.3 %Cys+Met (Translated Protein)
10.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
14.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIP
CEEEECCCCCCCCCCCCCCCCCCHHCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCC
RDPEHLETPGELMAKYHALQAAKGE
CCHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIP
EEEECCCCCCCCCCCCCCCCCCHHCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCC
RDPEHLETPGELMAKYHALQAAKGE
CCHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]