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The map label for this gene is ctpA [H]

Identifier: 91781664

GI number: 91781664

Start: 315918

End: 317498

Strand: Reverse

Name: ctpA [H]

Synonym: Bxe_A4182

Alternate gene names: 91781664

Gene position: 317498-315918 (Counterclockwise)

Preceding gene: 91781665

Following gene: 91781663

Centisome position: 6.49

GC content: 62.49

Gene sequence:

>1581_bases
ATGCGAAAGAACCTGAAAAATATCGGCCTGATTGCCGCGGGCCTTGCTACCGGTGTATTTGCCACTCTGCAGCTTTCCGC
TTCGGCGCAGCAACCGGCTAGCGCCGCCTCCAGCGCCGTTGCACCGCTGCCGCTGGACCAGCTCCGGCTGTTTGCCGAAG
TGTTCGGGCAAATCAAGCATGAATACGTCGAACCGGTCGACGACAAAAAGCTTCTCACCGCCGCCATCAAGGGCATGGTG
TCGAGCCTCGACCCGCACTCGTCGTATCTCGACAAGACCGATTACGAGGAACTGCAGGAGCAGACCAAGGGTCGCTTCGC
CGGTCTCGGCATCGAGATCTCGTCGGAAGACGGCCTGATCAAAGTGATTTCGCCGATCGAAGACACGCCCGCGTTCCGCG
CCGGCATCCGTCCGGGCGACCTGATCACGCGTATCAACGACAAACCCGTGCGCGGCATGACGCTCGACCAGGCGGTCAAG
CAGATGCGCGGCGACCCGGGCACCAAGGTCACGCTCACCATCTTCCGCAAGACCGACGACCGCACGTTCCCGCTCACCGT
GACGCGCGCGATCATCAAGGTCCAGTCGGTCAAGATGAAGATCCTCGCGCCGGGTTACGCCTATGTGCGTATCACCAGCT
TCCAGGAACGCACCACGCCTGATCTGGCCGCGAAGCTGCAGGACATCGCGCGTCAGCAGCCGAATCTGAAAGGTCTCGTG
CTCGACCTGCGCAATAACGGCGGCGGTCTGCTGCAAAGCGCGGTCGGCGTAGCCGGCGCGTTCCTGCCGCCGAATTCGGT
GGTGGTGTCCACCAACGGCCAGATTCCGGATTCGAAGCAGGTCTATCGCGACACTTACGACAACTACCGCCTGCAGTCTT
TCGACAGCGATCCGCTGAAGGACGAAGCGCCCATCTTCAAGACCGTGCCGATGATCGTGCTGACCAACGCGTACTCCGCG
TCGGCGTCGGAAATCGTCGCGGGCGCGCTGCAGGATCAGCACCGTGCGCTGATCGTCGGCAAGACCACCTTCGGCAAAGG
TTCGGTGCAGACCGTGCGGCCCATGACGGCGGACACGGCACTGCGTCTGACCACGGCGTACTACTACACGCCGAGCGGCC
GTTCGATCCAGAACAAAGGCATCCGCCCTGACATCGCGGTCGACCAATACGCGGAAGGCGATCCGGACGACGCGCTCGTC
ACCCGCGAAGTCGACTACTCGAATCACCTTGCGAATACGCAGGACCCGAACGAGAAGAAGGAAGCGGAACAGCGCGAACA
GGAACGCATGGACCAGTTGCGCCAGCTTGAAGAGCAGAACGACAAGAAGACGCCGGAACAGCGTCAGAAGGATCGTGAGC
GCAAGCCGGTGGAATTCGGTTCGGCCGACGACTTCATGCTGCAACAGGCTCTGAACAAGCTGGAAGGCAAGCCGGTGCAG
GAGTCGAAGTCGCTGACCGAGCGTCGTCTCGCGCAGAACAAGCCACCGGCGTCGGCTTCCGCGCCGGTCGCGGTCAAGCC
CACGCAACCGGTGCCCGGTGCATCGGCTCCGGCCTCGGCGCCTGCTACGCCAAGCAACTAA

Upstream 100 bases:

>100_bases
GATTGCCTGCGCTCCGCCCTGACTTGGCGGGTGTGCAGTTATACTTGTCCGTCCCCATCTCTATCGACGCTGCCACGCGC
TTCCGACCGCAACAGACTCT

Downstream 100 bases:

>100_bases
CCAGGCATCGAGCCCAACGTGCCTTCGCAGCGGAACATGCTGCGAAGGCACGGCTGCAATAGCCAACGGCATTAGCCGGC
TGCAATAGCCGGCACCAGCA

Product: peptidase S41A

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MRKNLKNIGLIAAGLATGVFATLQLSASAQQPASAASSAVAPLPLDQLRLFAEVFGQIKHEYVEPVDDKKLLTAAIKGMV
SSLDPHSSYLDKTDYEELQEQTKGRFAGLGIEISSEDGLIKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDQAVK
QMRGDPGTKVTLTIFRKTDDRTFPLTVTRAIIKVQSVKMKILAPGYAYVRITSFQERTTPDLAAKLQDIARQQPNLKGLV
LDLRNNGGGLLQSAVGVAGAFLPPNSVVVSTNGQIPDSKQVYRDTYDNYRLQSFDSDPLKDEAPIFKTVPMIVLTNAYSA
SASEIVAGALQDQHRALIVGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGIRPDIAVDQYAEGDPDDALV
TREVDYSNHLANTQDPNEKKEAEQREQERMDQLRQLEEQNDKKTPEQRQKDRERKPVEFGSADDFMLQQALNKLEGKPVQ
ESKSLTERRLAQNKPPASASAPVAVKPTQPVPGASAPASAPATPSN

Sequences:

>Translated_526_residues
MRKNLKNIGLIAAGLATGVFATLQLSASAQQPASAASSAVAPLPLDQLRLFAEVFGQIKHEYVEPVDDKKLLTAAIKGMV
SSLDPHSSYLDKTDYEELQEQTKGRFAGLGIEISSEDGLIKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDQAVK
QMRGDPGTKVTLTIFRKTDDRTFPLTVTRAIIKVQSVKMKILAPGYAYVRITSFQERTTPDLAAKLQDIARQQPNLKGLV
LDLRNNGGGLLQSAVGVAGAFLPPNSVVVSTNGQIPDSKQVYRDTYDNYRLQSFDSDPLKDEAPIFKTVPMIVLTNAYSA
SASEIVAGALQDQHRALIVGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGIRPDIAVDQYAEGDPDDALV
TREVDYSNHLANTQDPNEKKEAEQREQERMDQLRQLEEQNDKKTPEQRQKDRERKPVEFGSADDFMLQQALNKLEGKPVQ
ESKSLTERRLAQNKPPASASAPVAVKPTQPVPGASAPASAPATPSN
>Mature_526_residues
MRKNLKNIGLIAAGLATGVFATLQLSASAQQPASAASSAVAPLPLDQLRLFAEVFGQIKHEYVEPVDDKKLLTAAIKGMV
SSLDPHSSYLDKTDYEELQEQTKGRFAGLGIEISSEDGLIKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDQAVK
QMRGDPGTKVTLTIFRKTDDRTFPLTVTRAIIKVQSVKMKILAPGYAYVRITSFQERTTPDLAAKLQDIARQQPNLKGLV
LDLRNNGGGLLQSAVGVAGAFLPPNSVVVSTNGQIPDSKQVYRDTYDNYRLQSFDSDPLKDEAPIFKTVPMIVLTNAYSA
SASEIVAGALQDQHRALIVGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGIRPDIAVDQYAEGDPDDALV
TREVDYSNHLANTQDPNEKKEAEQREQERMDQLRQLEEQNDKKTPEQRQKDRERKPVEFGSADDFMLQQALNKLEGKPVQ
ESKSLTERRLAQNKPPASASAPVAVKPTQPVPGASAPASAPATPSN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=32.1533923303835, Blast_Score=142, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 57394; Mature: 57394

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNLKNIGLIAAGLATGVFATLQLSASAQQPASAASSAVAPLPLDQLRLFAEVFGQIKH
CCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EYVEPVDDKKLLTAAIKGMVSSLDPHSSYLDKTDYEELQEQTKGRFAGLGIEISSEDGLI
HHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCEE
KVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDQAVKQMRGDPGTKVTLTIFRKTDD
EEECCCCCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCC
RTFPLTVTRAIIKVQSVKMKILAPGYAYVRITSFQERTTPDLAAKLQDIARQQPNLKGLV
CCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCCEEE
LDLRNNGGGLLQSAVGVAGAFLPPNSVVVSTNGQIPDSKQVYRDTYDNYRLQSFDSDPLK
EEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCC
DEAPIFKTVPMIVLTNAYSASASEIVAGALQDQHRALIVGKTTFGKGSVQTVRPMTADTA
CCCCHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEECCCCCCCE
LRLTTAYYYTPSGRSIQNKGIRPDIAVDQYAEGDPDDALVTREVDYSNHLANTQDPNEKK
EEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCHHCCCCCCCCCHHH
EAEQREQERMDQLRQLEEQNDKKTPEQRQKDRERKPVEFGSADDFMLQQALNKLEGKPVQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCH
ESKSLTERRLAQNKPPASASAPVAVKPTQPVPGASAPASAPATPSN
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKNLKNIGLIAAGLATGVFATLQLSASAQQPASAASSAVAPLPLDQLRLFAEVFGQIKH
CCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EYVEPVDDKKLLTAAIKGMVSSLDPHSSYLDKTDYEELQEQTKGRFAGLGIEISSEDGLI
HHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCEE
KVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDQAVKQMRGDPGTKVTLTIFRKTDD
EEECCCCCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCC
RTFPLTVTRAIIKVQSVKMKILAPGYAYVRITSFQERTTPDLAAKLQDIARQQPNLKGLV
CCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCCEEE
LDLRNNGGGLLQSAVGVAGAFLPPNSVVVSTNGQIPDSKQVYRDTYDNYRLQSFDSDPLK
EEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCC
DEAPIFKTVPMIVLTNAYSASASEIVAGALQDQHRALIVGKTTFGKGSVQTVRPMTADTA
CCCCHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEECCCCCCCE
LRLTTAYYYTPSGRSIQNKGIRPDIAVDQYAEGDPDDALVTREVDYSNHLANTQDPNEKK
EEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCHHCCCCCCCCCHHH
EAEQREQERMDQLRQLEEQNDKKTPEQRQKDRERKPVEFGSADDFMLQQALNKLEGKPVQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCH
ESKSLTERRLAQNKPPASASAPVAVKPTQPVPGASAPASAPATPSN
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]