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The map label for this gene is bkdR [H]

Identifier: 91781527

GI number: 91781527

Start: 171590

End: 172048

Strand: Reverse

Name: bkdR [H]

Synonym: Bxe_A4319

Alternate gene names: 91781527

Gene position: 172048-171590 (Counterclockwise)

Preceding gene: 91781528

Following gene: 91781524

Centisome position: 3.51

GC content: 60.13

Gene sequence:

>459_bases
TTGACACTCGATACGTTCTCTCAAAAAATCCTGCGCCTGCTGCAGCTCGACGCACGCCGCTCGGTGCAAGAAATTTCCGA
CCAGGTCGGCCTGTCGAGCACGCCATGCTGGCGGCGCATCAAGGACATGGAGCAATCGGGGGTGATCCAGCGCTACACGG
CGCTGCTCGATCGGGAAAAGCTCGGCCTGCACGTGTGCGCCCTCGCCCATATCCATCTCACGCGGCACACCGAAGGCGGC
GTGGAACAGTTCGAGCGGGAAATCACCACCTGCCCGGAAGTCACCGAGTGCTACAGCACGACCGGGGAGTCCGACTACAT
CCTGAAGATCGTCGCGCCGGACATCAAGGCATACGATACCTTCCTGCACGAACGCATCTTCAAGATTCCCGCCGTCGCGC
AGGTTCGTACGAGCGTCGTGCTGCGCGAAATCAAATTCGATACGCAGTTGCCGTTGTGA

Upstream 100 bases:

>100_bases
GGCAAATTAGGTAATCTCCCTCGTCGAGGCCGTTTTACATTGCGTTTCGTTTTCGCCCCCTCTACCATGCGTTGATACGG
CGACGCAAACGGAGGCGCAG

Downstream 100 bases:

>100_bases
CGCGCTGATCGCTGAAGGTTGTCGTTTGTCGTTTGTTGCGCGCCGTAACCACAGCATGCGCGCGCAGCGCAGCCGTCAGG
TGGCGCTATGAGGTTCAGTA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTLDTFSQKILRLLQLDARRSVQEISDQVGLSSTPCWRRIKDMEQSGVIQRYTALLDREKLGLHVCALAHIHLTRHTEGG
VEQFEREITTCPEVTECYSTTGESDYILKIVAPDIKAYDTFLHERIFKIPAVAQVRTSVVLREIKFDTQLPL

Sequences:

>Translated_152_residues
MTLDTFSQKILRLLQLDARRSVQEISDQVGLSSTPCWRRIKDMEQSGVIQRYTALLDREKLGLHVCALAHIHLTRHTEGG
VEQFEREITTCPEVTECYSTTGESDYILKIVAPDIKAYDTFLHERIFKIPAVAQVRTSVVLREIKFDTQLPL
>Mature_151_residues
TLDTFSQKILRLLQLDARRSVQEISDQVGLSSTPCWRRIKDMEQSGVIQRYTALLDREKLGLHVCALAHIHLTRHTEGGV
EQFEREITTCPEVTECYSTTGESDYILKIVAPDIKAYDTFLHERIFKIPAVAQVRTSVVLREIKFDTQLPL

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=35.3333333333333, Blast_Score=110, Evalue=4e-26,
Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=39.1891891891892, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17431; Mature: 17300

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDTFSQKILRLLQLDARRSVQEISDQVGLSSTPCWRRIKDMEQSGVIQRYTALLDREK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LGLHVCALAHIHLTRHTEGGVEQFEREITTCPEVTECYSTTGESDYILKIVAPDIKAYDT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHH
FLHERIFKIPAVAQVRTSVVLREIKFDTQLPL
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLDTFSQKILRLLQLDARRSVQEISDQVGLSSTPCWRRIKDMEQSGVIQRYTALLDREK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LGLHVCALAHIHLTRHTEGGVEQFEREITTCPEVTECYSTTGESDYILKIVAPDIKAYDT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHH
FLHERIFKIPAVAQVRTSVVLREIKFDTQLPL
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]