| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781528
Identifier: 91781528
GI number: 91781528
Start: 172139
End: 172768
Strand: Reverse
Name: 91781528
Synonym: Bxe_A4318
Alternate gene names: NA
Gene position: 172768-172139 (Counterclockwise)
Preceding gene: 91781529
Following gene: 91781527
Centisome position: 3.53
GC content: 60.79
Gene sequence:
>630_bases ATGAGCAGCGAAATCTACGTGAGCACCGATGTCGAAGCGGACGGCCCGATTCCCGGTCCGCATTCCATGCTCAGTTTCGC CTCCGCCGCCTACACCGAAGACAAGCGGTTGATCGCAACCTTCTCGGCGAATCTCGAACTGCTCGAGGGAGCGCGGCCGC ATCCCGTGCAGGAAGCGTGGTGGAAGACTCAGCCCGAAGCATGGGAAGCCTGCCGCAAGGATTTGCAGACGCCCGTGGCT GCTTTGACGGCGTACGTCGACTGGGTCGAAGCGCTGCCGGGCAAGCCGGTGTTCGTGGCGATGCCGGCGGGCTTCGACTT CACATACATGTTCTGGTACATGATGCGGTTTGTCGGCCGCTGTCCGTTTTCGTGGTCGGCGCTCGACATCAAGACGCTGG CCTTCGCCATGACCGGGCTGCCGTACCGCAAGAACATCAAGCCGCGCTTTCCGAAACACTGGTTCGACGAGCATCCGCAT ACGCATGTCGCGCTGGATGACGCCATCGAACAGGGCGCGCTTTTCTGCAATATGTTGAAGGATCTACGCGCCAGTCAGGC GATCACGCTCGCGGCCGGTAAAGATGGGGACGGCACAGGACAAAACCCCGCTGAGAAACCGGCAAATTAG
Upstream 100 bases:
>100_bases CGCTCGGCGACGACGTCACCTTCGTCCCGGGCCACGGGCCGACTTCCACGTTCGGCGCCGAACGCCGCACCAATCCGTAC GTCTGCGACGGAGTCGAGGC
Downstream 100 bases:
>100_bases GTAATCTCCCTCGTCGAGGCCGTTTTACATTGCGTTTCGTTTTCGCCCCCTCTACCATGCGTTGATACGGCGACGCAAAC GGAGGCGCAGTTGACACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Exonuclease RNAse T And DNA Polymerase III
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSSEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKRLIATFSANLELLEGARPHPVQEAWWKTQPEAWEACRKDLQTPVA ALTAYVDWVEALPGKPVFVAMPAGFDFTYMFWYMMRFVGRCPFSWSALDIKTLAFAMTGLPYRKNIKPRFPKHWFDEHPH THVALDDAIEQGALFCNMLKDLRASQAITLAAGKDGDGTGQNPAEKPAN
Sequences:
>Translated_209_residues MSSEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKRLIATFSANLELLEGARPHPVQEAWWKTQPEAWEACRKDLQTPVA ALTAYVDWVEALPGKPVFVAMPAGFDFTYMFWYMMRFVGRCPFSWSALDIKTLAFAMTGLPYRKNIKPRFPKHWFDEHPH THVALDDAIEQGALFCNMLKDLRASQAITLAAGKDGDGTGQNPAEKPAN >Mature_208_residues SSEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKRLIATFSANLELLEGARPHPVQEAWWKTQPEAWEACRKDLQTPVAA LTAYVDWVEALPGKPVFVAMPAGFDFTYMFWYMMRFVGRCPFSWSALDIKTLAFAMTGLPYRKNIKPRFPKHWFDEHPHT HVALDDAIEQGALFCNMLKDLRASQAITLAAGKDGDGTGQNPAEKPAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23297; Mature: 23165
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKRLIATFSANLELLEGARPHPVQEAW CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCHHHH WKTQPEAWEACRKDLQTPVAALTAYVDWVEALPGKPVFVAMPAGFDFTYMFWYMMRFVGR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHC CPFSWSALDIKTLAFAMTGLPYRKNIKPRFPKHWFDEHPHTHVALDDAIEQGALFCNMLK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHH DLRASQAITLAAGKDGDGTGQNPAEKPAN HHHHCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SSEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKRLIATFSANLELLEGARPHPVQEAW CCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCHHHH WKTQPEAWEACRKDLQTPVAALTAYVDWVEALPGKPVFVAMPAGFDFTYMFWYMMRFVGR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHC CPFSWSALDIKTLAFAMTGLPYRKNIKPRFPKHWFDEHPHTHVALDDAIEQGALFCNMLK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHH DLRASQAITLAAGKDGDGTGQNPAEKPAN HHHHCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA