| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781524
Identifier: 91781524
GI number: 91781524
Start: 168173
End: 169438
Strand: Reverse
Name: 91781524
Synonym: Bxe_A4322
Alternate gene names: NA
Gene position: 169438-168173 (Counterclockwise)
Preceding gene: 91781527
Following gene: 91781522
Centisome position: 3.46
GC content: 61.53
Gene sequence:
>1266_bases ATGAGCAAGTTTACGGAAAAAGAAGTCATCGGTCTATCGGGTGCCGGTCTCGGCCTGGACGAGTTGGTCCGCCAAGGAGC ACGGCAGGTGATTCAACAAGCGATTGAAGCGGAGCTGGCAGAGCTGATGGAGCGGTTCGCGAACGTCAAGACCATGCACG GGCAGCGCGCCGTGGTGCGCAACGGCTACTTGCCGGAACGCGAGGTATTGACGGCGGCCGGGCCGATTCCGGTGAAAGTG CCGAAGGTGCGCGATCGATCGGGATCAGGCGTGAAGTTCAATTCGTCGATCGTGCCGCCGTACGTGAGGAAGTCGCCCCG CGTGAGCGCCGCGTTGCCGTGGCTGTATCTGAAGGGCATCTCGACGGGCGACATGAGCGAAGCGTTGAGCGTGCTGTTGG GTGAGGATGCCAAGGGTTTGTCGGCGAATGTGGTGAGCCGGCTAAAGGCGCAATGGACCGAAGAACACGTAGCCTGGAGC AAGCGAGACTTGTCGAAATCGCGCTATGTGTACTGGTGGGTCGACGGCATTCACACCGGGCTGCGCAGCGAGAATTCGGA CGGTCAATGCCTGCTGGTGATCATCGGCGTGAGGCCGGATGGGAGCAAAGAGCGCGTGGCGATCGGCGACGGCTACCGTG AGACGAAGGCGTCGTGGCTGGAGCTGCTGCTGGAGCTGAAAGCGCGTGGCTTGCAGGCGGGGCCATTGCTGGCTGTTGGC GACGGCGCAATGGGCTTCTGGGCGGCCCTGGAAGAAGTGTTTCCGGCCACGCGTGGCCAGCGCTGCTGGTTTCACAAGAT GGGCAACGTGCTCAATGCGCTGCCGAAGTCGCAACAGGGGCGCGCGAAGGCGGACATGCAGGCGATCTGGATGGCCGCCA CGCGCGCCGAGGCACATGCCGCGTTCGATCGTTTCGTGTCGATCTATGCGGCGAAATATCCGAAAGCAGCCGAAACGCTG AAGAAGGATCGAGACAGCTTGCTCGCGTTTTACGACTTCCCTGCCGAGCATTGGCAGCATCTGCGCACCACCAACGCGAT CGAGTCGACGTTCGCGACCGTGCGGCACCGCACGACACGTACGCGCAATTGCGTGTCGCGACCAACCTTCCTCGGTCTGG CATTCAAGCTGATCGAGGAGGCTGAGAAGACTTGGCGCCGTATTAACGGCCCGGAAAAGATCAAGCTGTTGCTCGAGGGC ATTGCCTTTAAGGACGGCGAACCGGTGCAAGACGATCGACCGGTTCAGCAGAAACGCGCCGCTTGA
Upstream 100 bases:
>100_bases GTGTACGGGGGAGTTGAGGCGGAAGGTTGAAGGCGGTGGAGGTTTCAGCTGAGAATCTGATTGTCGAAGTCGGAAACCAG CAAACAACAAACCATCCACC
Downstream 100 bases:
>100_bases AATCGACCGCCATCAAAATGTTCGTACACCACTCTTGACGTTAGCTCAAAACTACAAAAGCGCACGCGTTAAATTAATCA AAATACGTTTCAAAAAATTT
Product: mutator family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSKFTEKEVIGLSGAGLGLDELVRQGARQVIQQAIEAELAELMERFANVKTMHGQRAVVRNGYLPEREVLTAAGPIPVKV PKVRDRSGSGVKFNSSIVPPYVRKSPRVSAALPWLYLKGISTGDMSEALSVLLGEDAKGLSANVVSRLKAQWTEEHVAWS KRDLSKSRYVYWWVDGIHTGLRSENSDGQCLLVIIGVRPDGSKERVAIGDGYRETKASWLELLLELKARGLQAGPLLAVG DGAMGFWAALEEVFPATRGQRCWFHKMGNVLNALPKSQQGRAKADMQAIWMAATRAEAHAAFDRFVSIYAAKYPKAAETL KKDRDSLLAFYDFPAEHWQHLRTTNAIESTFATVRHRTTRTRNCVSRPTFLGLAFKLIEEAEKTWRRINGPEKIKLLLEG IAFKDGEPVQDDRPVQQKRAA
Sequences:
>Translated_421_residues MSKFTEKEVIGLSGAGLGLDELVRQGARQVIQQAIEAELAELMERFANVKTMHGQRAVVRNGYLPEREVLTAAGPIPVKV PKVRDRSGSGVKFNSSIVPPYVRKSPRVSAALPWLYLKGISTGDMSEALSVLLGEDAKGLSANVVSRLKAQWTEEHVAWS KRDLSKSRYVYWWVDGIHTGLRSENSDGQCLLVIIGVRPDGSKERVAIGDGYRETKASWLELLLELKARGLQAGPLLAVG DGAMGFWAALEEVFPATRGQRCWFHKMGNVLNALPKSQQGRAKADMQAIWMAATRAEAHAAFDRFVSIYAAKYPKAAETL KKDRDSLLAFYDFPAEHWQHLRTTNAIESTFATVRHRTTRTRNCVSRPTFLGLAFKLIEEAEKTWRRINGPEKIKLLLEG IAFKDGEPVQDDRPVQQKRAA >Mature_420_residues SKFTEKEVIGLSGAGLGLDELVRQGARQVIQQAIEAELAELMERFANVKTMHGQRAVVRNGYLPEREVLTAAGPIPVKVP KVRDRSGSGVKFNSSIVPPYVRKSPRVSAALPWLYLKGISTGDMSEALSVLLGEDAKGLSANVVSRLKAQWTEEHVAWSK RDLSKSRYVYWWVDGIHTGLRSENSDGQCLLVIIGVRPDGSKERVAIGDGYRETKASWLELLLELKARGLQAGPLLAVGD GAMGFWAALEEVFPATRGQRCWFHKMGNVLNALPKSQQGRAKADMQAIWMAATRAEAHAAFDRFVSIYAAKYPKAAETLK KDRDSLLAFYDFPAEHWQHLRTTNAIESTFATVRHRTTRTRNCVSRPTFLGLAFKLIEEAEKTWRRINGPEKIKLLLEGI AFKDGEPVQDDRPVQQKRAA
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 46864; Mature: 46733
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFTEKEVIGLSGAGLGLDELVRQGARQVIQQAIEAELAELMERFANVKTMHGQRAVVR CCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NGYLPEREVLTAAGPIPVKVPKVRDRSGSGVKFNSSIVPPYVRKSPRVSAALPWLYLKGI CCCCCCHHHHHCCCCCCEECCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHCCCHHEECC STGDMSEALSVLLGEDAKGLSANVVSRLKAQWTEEHVAWSKRDLSKSRYVYWWVDGIHTG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHH LRSENSDGQCLLVIIGVRPDGSKERVAIGDGYRETKASWLELLLELKARGLQAGPLLAVG HCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEC DGAMGFWAALEEVFPATRGQRCWFHKMGNVLNALPKSQQGRAKADMQAIWMAATRAEAHA CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AFDRFVSIYAAKYPKAAETLKKDRDSLLAFYDFPAEHWQHLRTTNAIESTFATVRHRTTR HHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH TRNCVSRPTFLGLAFKLIEEAEKTWRRINGPEKIKLLLEGIAFKDGEPVQDDRPVQQKRA HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC A C >Mature Secondary Structure SKFTEKEVIGLSGAGLGLDELVRQGARQVIQQAIEAELAELMERFANVKTMHGQRAVVR CCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NGYLPEREVLTAAGPIPVKVPKVRDRSGSGVKFNSSIVPPYVRKSPRVSAALPWLYLKGI CCCCCCHHHHHCCCCCCEECCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHCCCHHEECC STGDMSEALSVLLGEDAKGLSANVVSRLKAQWTEEHVAWSKRDLSKSRYVYWWVDGIHTG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHH LRSENSDGQCLLVIIGVRPDGSKERVAIGDGYRETKASWLELLLELKARGLQAGPLLAVG HCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEC DGAMGFWAALEEVFPATRGQRCWFHKMGNVLNALPKSQQGRAKADMQAIWMAATRAEAHA CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AFDRFVSIYAAKYPKAAETLKKDRDSLLAFYDFPAEHWQHLRTTNAIESTFATVRHRTTR HHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH TRNCVSRPTFLGLAFKLIEEAEKTWRRINGPEKIKLLLEGIAFKDGEPVQDDRPVQQKRA HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3174633 [H]