| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is coxS [H]
Identifier: 91781495
GI number: 91781495
Start: 133809
End: 134339
Strand: Reverse
Name: coxS [H]
Synonym: Bxe_A4351
Alternate gene names: 91781495
Gene position: 134339-133809 (Counterclockwise)
Preceding gene: 91781497
Following gene: 91781494
Centisome position: 2.74
GC content: 64.41
Gene sequence:
>531_bases ATGGCGATCAGCATCAGTCTGACGGTGAACGGCGCGCCCATCAGCGCCTCAATCGACCCTGGCACCCTGCTAGTCCAGTT CCTTCGCGAGCAACTGCGTCTCACCGGCACACACGTCGGCTGCGATACAGCCCAATGCGGCGCGTGCACGGTCCATCTGA ACGGACGCGCGATCAAATCCTGCAACATCCTCGCGGTGCAGGCGGACGGCGCGAAAATCACCACCATCGAGGGGCTCGCC AAAGACGGCACACTGCATCCCATGCAGGCAGCCTTCAAACATTGCCACGGCCTGCAATGCGGCTTCTGTACGCCCGGCAT GGTGATGAGCGCAGTCTCGCTCGTCCAGCGCCAGCCGGATCTCACCGGCGACGACGTACGCGCCCAGCTCGACGGCAATC TGTGCCGCTGTACGGGCTATCACAACATCGTCAAAGCAGTGCTCGAAGGCGCCGAAGGCATGAAGTCCACCGGCACGGCC AACGCCGCCGCGAATGCCACCGCGCAGGCCAACGCACCGGCCACCGCCTGA
Upstream 100 bases:
>100_bases CCCCGCAACACCCCAACCGGCCCCACGAAAAAAAACAGGCAACCGAAGGCAAACAACAACCGCAAAAAGGTCCGGTCTCA CCCCATAAGGAGACAACTTC
Downstream 100 bases:
>100_bases GGAGCCGACGATGAACGCACCCGAAACTCACCTGATCGGCGCCTCCGTCGAACGTAAGGAAGACTATCGTTTCCTGACCG GCAACGGCCAGTACACCGAC
Product: putative carbon-monoxide dehydrogenase, small subunit (CoxS)
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MAISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKSCNILAVQADGAKITTIEGLA KDGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPDLTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTA NAAANATAQANAPATA
Sequences:
>Translated_176_residues MAISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKSCNILAVQADGAKITTIEGLA KDGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPDLTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTA NAAANATAQANAPATA >Mature_175_residues AISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKSCNILAVQADGAKITTIEGLAK DGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPDLTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTAN AAANATAQANAPATA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=150, Percent_Identity=41.3333333333333, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI91823271, Length=150, Percent_Identity=40, Blast_Score=94, Evalue=9e-20, Organism=Escherichia coli, GI1786480, Length=169, Percent_Identity=43.1952662721894, Blast_Score=140, Evalue=6e-35, Organism=Escherichia coli, GI1789232, Length=149, Percent_Identity=46.3087248322148, Blast_Score=129, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17540638, Length=156, Percent_Identity=40.3846153846154, Blast_Score=122, Evalue=9e-29, Organism=Caenorhabditis elegans, GI32566215, Length=154, Percent_Identity=37.6623376623377, Blast_Score=114, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17539860, Length=154, Percent_Identity=36.3636363636364, Blast_Score=112, Evalue=1e-25, Organism=Drosophila melanogaster, GI17737937, Length=161, Percent_Identity=42.8571428571429, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI24647195, Length=160, Percent_Identity=38.125, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=38.125, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647201, Length=154, Percent_Identity=35.0649350649351, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647199, Length=154, Percent_Identity=35.0649350649351, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24647193, Length=156, Percent_Identity=34.6153846153846, Blast_Score=80, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 18059; Mature: 17928
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKS CEEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECC CNILAVQADGAKITTIEGLAKDGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPD CEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC LTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTANAAANATAQANAPATA CCCCCEEEEECCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKS EEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECC CNILAVQADGAKITTIEGLAKDGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPD CEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC LTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTANAAANATAQANAPATA CCCCCEEEEECCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721710; 2818128; 10430865; 12475995 [H]