| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89898664
Identifier: 89898664
GI number: 89898664
Start: 1006863
End: 1007657
Strand: Direct
Name: 89898664
Synonym: CF0857
Alternate gene names: NA
Gene position: 1006863-1007657 (Clockwise)
Preceding gene: 89898662
Following gene: 89898665
Centisome position: 86.33
GC content: 38.62
Gene sequence:
>795_bases ATGCGTTGTACCGCTCATTGCACAGCTTCGTCGTATAATTTACACGTGCTCTTTCACTTACTTAAGACACGTTTCCCCAC AGTGCTATCTAGGGAATATGTGCTAGTCTCTTCGGAAAATCCTGATGAATATGACAAGATTGCTGTGTTTTTCCCTTTTG GAGTTGCTGTTTTTTGGGGTTGGGAAGAATTTGAGGAAATCAAGGTTCTTCAATCTATTGTTACAGCTTCTCCGGAAATT CTTCCCCAACCAGAAATAGACTGTTACAATTTTCATTACGGAGAAAAACTTCAAATACGCAGAGACAGACTTATTCTCTC TGATTCTCAATTAAATACAAAATTAGCGATATCTTTTGGTCTCGCCCAATCAGTAAAGCTCACTATATTTGAAGCCACCA TTTATAAAACTATTGAAGATTCCAAGCGTCTTCCTCAAGATCTGGCAACAAAAGGGAAAATCTCCATGCCAAGGAGGGCT ATCGCAAAAAAAATTGGCAAATTATTTTTGGATAAAGCCTCTGTTAACCTCCATTCTGATATTCTTGATGAGCCAGACTT TTTCTGGGAACATCCGGAAACACAACCTATTTACATTGACGTACTCAACTGCCTGGATATTAACGCGAGAATCAATGTTC TCAATCACAGGTTAACAATCCTTGGAGATGTATTGGAAATCTTAAACGATCAGCTCAACCACCAGCACTCTTCATCCCTA GAATGGACTATTATCTGGCTTATTATGTTAGAAGTTTCTGTAGCCCTACTCAAAGACGTTTTCAATGTCATTTAA
Upstream 100 bases:
>100_bases CTTAGCGAGGAAATCCCCTTTACCTCAAGAAAAAAAATGTTTCCGACAGAGGAAAAATGAAGTACATTAGAGAGAGATTT AACAATAATTTTTAGGAATC
Downstream 100 bases:
>100_bases ATCGCTTTTAAAAAACCTCCCTAAGTTCTTCTTCCTTGGGCTTATTCACATCTATAGATGGACTATTTCCCCTTTACTAG GAAGCCCTTGCAGATTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MRCTAHCTASSYNLHVLFHLLKTRFPTVLSREYVLVSSENPDEYDKIAVFFPFGVAVFWGWEEFEEIKVLQSIVTASPEI LPQPEIDCYNFHYGEKLQIRRDRLILSDSQLNTKLAISFGLAQSVKLTIFEATIYKTIEDSKRLPQDLATKGKISMPRRA IAKKIGKLFLDKASVNLHSDILDEPDFFWEHPETQPIYIDVLNCLDINARINVLNHRLTILGDVLEILNDQLNHQHSSSL EWTIIWLIMLEVSVALLKDVFNVI
Sequences:
>Translated_264_residues MRCTAHCTASSYNLHVLFHLLKTRFPTVLSREYVLVSSENPDEYDKIAVFFPFGVAVFWGWEEFEEIKVLQSIVTASPEI LPQPEIDCYNFHYGEKLQIRRDRLILSDSQLNTKLAISFGLAQSVKLTIFEATIYKTIEDSKRLPQDLATKGKISMPRRA IAKKIGKLFLDKASVNLHSDILDEPDFFWEHPETQPIYIDVLNCLDINARINVLNHRLTILGDVLEILNDQLNHQHSSSL EWTIIWLIMLEVSVALLKDVFNVI >Mature_264_residues MRCTAHCTASSYNLHVLFHLLKTRFPTVLSREYVLVSSENPDEYDKIAVFFPFGVAVFWGWEEFEEIKVLQSIVTASPEI LPQPEIDCYNFHYGEKLQIRRDRLILSDSQLNTKLAISFGLAQSVKLTIFEATIYKTIEDSKRLPQDLATKGKISMPRRA IAKKIGKLFLDKASVNLHSDILDEPDFFWEHPETQPIYIDVLNCLDINARINVLNHRLTILGDVLEILNDQLNHQHSSSL EWTIIWLIMLEVSVALLKDVFNVI
Specific function: Unknown
COG id: COG1723
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI157388927, Length=290, Percent_Identity=28.2758620689655, Blast_Score=104, Evalue=9e-23, Organism=Caenorhabditis elegans, GI71996861, Length=220, Percent_Identity=27.7272727272727, Blast_Score=78, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320203, Length=303, Percent_Identity=33.993399339934, Blast_Score=166, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6321163, Length=229, Percent_Identity=31.4410480349345, Blast_Score=106, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6320488, Length=193, Percent_Identity=31.6062176165803, Blast_Score=104, Evalue=1e-23, Organism=Drosophila melanogaster, GI18859701, Length=236, Percent_Identity=29.2372881355932, Blast_Score=104, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30414; Mature: 30414
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCTAHCTASSYNLHVLFHLLKTRFPTVLSREYVLVSSENPDEYDKIAVFFPFGVAVFWG CCCEEECCCCCCHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCHHEEEEEEECHHHEEEC WEEFEEIKVLQSIVTASPEILPQPEIDCYNFHYGEKLQIRRDRLILSDSQLNTKLAISFG HHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCEEEEECCCCCEEEEEEEC LAQSVKLTIFEATIYKTIEDSKRLPQDLATKGKISMPRRAIAKKIGKLFLDKASVNLHSD CCCCEEEEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH ILDEPDFFWEHPETQPIYIDVLNCLDINARINVLNHRLTILGDVLEILNDQLNHQHSSSL HCCCCCCCCCCCCCCEEEEEEEEHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC EWTIIWLIMLEVSVALLKDVFNVI HHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRCTAHCTASSYNLHVLFHLLKTRFPTVLSREYVLVSSENPDEYDKIAVFFPFGVAVFWG CCCEEECCCCCCHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCHHEEEEEEECHHHEEEC WEEFEEIKVLQSIVTASPEILPQPEIDCYNFHYGEKLQIRRDRLILSDSQLNTKLAISFG HHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCEEEEECCCCCEEEEEEEC LAQSVKLTIFEATIYKTIEDSKRLPQDLATKGKISMPRRAIAKKIGKLFLDKASVNLHSD CCCCEEEEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH ILDEPDFFWEHPETQPIYIDVLNCLDINARINVLNHRLTILGDVLEILNDQLNHQHSSSL HCCCCCCCCCCCCCCEEEEEEEEHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC EWTIIWLIMLEVSVALLKDVFNVI HHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA