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The map label for this gene is recO [H]

Identifier: 89898662

GI number: 89898662

Start: 1005298

End: 1006041

Strand: Direct

Name: recO [H]

Synonym: CF0855

Alternate gene names: 89898662

Gene position: 1005298-1006041 (Clockwise)

Preceding gene: 89898661

Following gene: 89898664

Centisome position: 86.2

GC content: 41.4

Gene sequence:

>744_bases
ATGCACACCCTAACCCCTGCAATTGCATTAAAAAATCTTCCTCTGGGGAAAAACCACTGTGTAACTACAATATTTTCTCC
CTTAGGTCTGCTTTCATTTTTCGCCAAGCATGGCCAAACCCTACACTGTGATTTTCGAGAAGCCCTTATCCCCTTATCTC
TGGGAATTTACAGTCTAGACTACTCTCCCCCTAAAATGCGCAAGCTGATCTCCGCTGAAGTAAACAATCCCTTTTCAGAA
ATAAAATCGTCATTCCCTCTACTTCAAGCTGCAGGGAAAATGGGACAGAGTATTTTAGAATCGCAGTGGCAAGAAAAACC
TTCTCAAAAACTGTTTTCTTTATTTTTAAACTTCCTCCACCGCCTACCCGAAAGTAAAAATCCCGAAATGTTTTCAGCGA
CTTTCTTACTCAAACTCTTACAATATGAAGGGATCCTTGATCTCTCCTCCACGTGCGCCACCTGTAAACAACATATCCCT
ACGCAACAGTGTTATCGTCATAAAGGAATGAAATTTTGCCTAGAACACGGGCCTGAATCCGCAGTGAGTATAGAAAACGA
GGAAGAACAAATTCTCCAAGCACTTGTACATGCCAAGAGATTTCAAGATCTGCTACATTTATCGGATTTTCCCTTAGGAT
TTTCGGAAAAAATTATCCACATGTTTGAAAGCACTATCCATGAGGATAAGAAATTACTGCAAAGTGATGGTTCCACCAGA
GCCACTGTGCACGTCAAAGACTAG

Upstream 100 bases:

>100_bases
AAAACGCAAACCCTAGATTTTTACCCGGGATTGCCCAGTTACTCCCAGCTCCTCTCCTATTACCTAACTCTCAACTCCGC
ACAACCTGTAAACTAAACAC

Downstream 100 bases:

>100_bases
GGTAATTGGCGCTATACCCACCAAAGAGTTGTGATATGTTTTCTTCCAAATACCACGACCTTGTTTTTCAAAATTTCCCT
CTACAATAACCTTCCCTTTT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MHTLTPAIALKNLPLGKNHCVTTIFSPLGLLSFFAKHGQTLHCDFREALIPLSLGIYSLDYSPPKMRKLISAEVNNPFSE
IKSSFPLLQAAGKMGQSILESQWQEKPSQKLFSLFLNFLHRLPESKNPEMFSATFLLKLLQYEGILDLSSTCATCKQHIP
TQQCYRHKGMKFCLEHGPESAVSIENEEEQILQALVHAKRFQDLLHLSDFPLGFSEKIIHMFESTIHEDKKLLQSDGSTR
ATVHVKD

Sequences:

>Translated_247_residues
MHTLTPAIALKNLPLGKNHCVTTIFSPLGLLSFFAKHGQTLHCDFREALIPLSLGIYSLDYSPPKMRKLISAEVNNPFSE
IKSSFPLLQAAGKMGQSILESQWQEKPSQKLFSLFLNFLHRLPESKNPEMFSATFLLKLLQYEGILDLSSTCATCKQHIP
TQQCYRHKGMKFCLEHGPESAVSIENEEEQILQALVHAKRFQDLLHLSDFPLGFSEKIIHMFESTIHEDKKLLQSDGSTR
ATVHVKD
>Mature_247_residues
MHTLTPAIALKNLPLGKNHCVTTIFSPLGLLSFFAKHGQTLHCDFREALIPLSLGIYSLDYSPPKMRKLISAEVNNPFSE
IKSSFPLLQAAGKMGQSILESQWQEKPSQKLFSLFLNFLHRLPESKNPEMFSATFLLKLLQYEGILDLSSTCATCKQHIP
TQQCYRHKGMKFCLEHGPESAVSIENEEEQILQALVHAKRFQDLLHLSDFPLGFSEKIIHMFESTIHEDKKLLQSDGSTR
ATVHVKD

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27949; Mature: 27949

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLTPAIALKNLPLGKNHCVTTIFSPLGLLSFFAKHGQTLHCDFREALIPLSLGIYSLD
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHEECC
YSPPKMRKLISAEVNNPFSEIKSSFPLLQAAGKMGQSILESQWQEKPSQKLFSLFLNFLH
CCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RLPESKNPEMFSATFLLKLLQYEGILDLSSTCATCKQHIPTQQCYRHKGMKFCLEHGPES
HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
AVSIENEEEQILQALVHAKRFQDLLHLSDFPLGFSEKIIHMFESTIHEDKKLLQSDGSTR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
ATVHVKD
EEEEECC
>Mature Secondary Structure
MHTLTPAIALKNLPLGKNHCVTTIFSPLGLLSFFAKHGQTLHCDFREALIPLSLGIYSLD
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHEECC
YSPPKMRKLISAEVNNPFSEIKSSFPLLQAAGKMGQSILESQWQEKPSQKLFSLFLNFLH
CCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RLPESKNPEMFSATFLLKLLQYEGILDLSSTCATCKQHIPTQQCYRHKGMKFCLEHGPES
HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
AVSIENEEEQILQALVHAKRFQDLLHLSDFPLGFSEKIIHMFESTIHEDKKLLQSDGSTR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
ATVHVKD
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA