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The map label for this gene is yidD [C]

Identifier: 89898665

GI number: 89898665

Start: 1007647

End: 1007958

Strand: Direct

Name: yidD [C]

Synonym: CF0858

Alternate gene names: 89898665

Gene position: 1007647-1007958 (Clockwise)

Preceding gene: 89898664

Following gene: 89898667

Centisome position: 86.4

GC content: 42.31

Gene sequence:

>312_bases
ATGTCATTTAAATCGCTTTTAAAAAACCTCCCTAAGTTCTTCTTCCTTGGGCTTATTCACATCTATAGATGGACTATTTC
CCCTTTACTAGGAAGCCCTTGCAGATTTTTCCCGACATGCTCACAGTATGCTCTGCAAGCCTTAAAACATCACGGGTGCA
TTAAAGGACTGGGATTCACCATAAAAAGAATTGGGAAATGTGGCCCCTGGCATCCAGGTGGAGTTGATCTAGTTCCTATG
ACGACTTTGGAGGAATCTTTAGACATTTCCCCGGCAACAAACGATGATGACTCATGTGATTCACAAGCATAA

Upstream 100 bases:

>100_bases
AACGATCAGCTCAACCACCAGCACTCTTCATCCCTAGAATGGACTATTATCTGGCTTATTATGTTAGAAGTTTCTGTAGC
CCTACTCAAAGACGTTTTCA

Downstream 100 bases:

>100_bases
TTTCTTCAACTGTTACCCCAAAACGCCGCGCTATTAGCCATAAGGAATCTCCATCTTTTACAATATACTCCTCTTCAACA
GCTTTTTGAGCATCAGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSFKSLLKNLPKFFFLGLIHIYRWTISPLLGSPCRFFPTCSQYALQALKHHGCIKGLGFTIKRIGKCGPWHPGGVDLVPM
TTLEESLDISPATNDDDSCDSQA

Sequences:

>Translated_103_residues
MSFKSLLKNLPKFFFLGLIHIYRWTISPLLGSPCRFFPTCSQYALQALKHHGCIKGLGFTIKRIGKCGPWHPGGVDLVPM
TTLEESLDISPATNDDDSCDSQA
>Mature_102_residues
SFKSLLKNLPKFFFLGLIHIYRWTISPLLGSPCRFFPTCSQYALQALKHHGCIKGLGFTIKRIGKCGPWHPGGVDLVPMT
TLEESLDISPATNDDDSCDSQA

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=66, Percent_Identity=54.5454545454545, Blast_Score=75, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y858_CHLFF (Q253A8)

Other databases:

- EMBL:   AP006861
- RefSeq:   YP_515775.1
- STRING:   Q253A8
- GeneID:   3959275
- GenomeReviews:   AP006861_GR
- KEGG:   cfe:CF0858
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   VPMTTLE
- ProtClustDB:   PRK14381
- BioCyc:   CFEL264202:CF0858-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 11427; Mature: 11296

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKSLLKNLPKFFFLGLIHIYRWTISPLLGSPCRFFPTCSQYALQALKHHGCIKGLGFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
IKRIGKCGPWHPGGVDLVPMTTLEESLDISPATNDDDSCDSQA
HHHHCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFKSLLKNLPKFFFLGLIHIYRWTISPLLGSPCRFFPTCSQYALQALKHHGCIKGLGFT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
IKRIGKCGPWHPGGVDLVPMTTLEESLDISPATNDDDSCDSQA
HHHHCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA