| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89898565
Identifier: 89898565
GI number: 89898565
Start: 901774
End: 902817
Strand: Direct
Name: 89898565
Synonym: CF0758
Alternate gene names: NA
Gene position: 901774-902817 (Clockwise)
Preceding gene: 89898564
Following gene: 89898569
Centisome position: 77.32
GC content: 37.45
Gene sequence:
>1044_bases ATGATTCTTCGCAAAATTGCTCAATATGCTTTTTTCCTTTCTCTTATCTGTTCTTTTATTGCTGTGGTTATCTCTTCTCC TAACCCCGAACAGGGATCACCGAAAGTTGCTGTATTTTTGTCTTTCTCCCACTCAATACTTGAAGATTGTAGTCAAAGCT GCATAGAAGTTTTAAAGTCTCTAGAAAACTCTCCGGAAGTTCTTGTTGTTAATGCTGAAGATAGCGTGGTGAAAGCAAGG AAAATCGCCCGTTTGCTACATAGTGATCAAAACATTGTGGCTATTGTTACCTTAGGCTCTATAGCCACAAAAATTATGAG CCAAATTGAAACAAAAAAACCGATTATCTATGCTGCGGTTCCTGATGGAGAGACTCTTGCTTTCTCTAAAAAACAAACAA ATATCTATGGTGTCAATGACACCTTAGATATCAATCAATGCTGTTTTGCCATACAAGCCGTAAGAACCAATGCAGAATCT TTGGTCTATATAAAGCCTGTAGAACCCTTCCCTTCGGCCCTACAAAAAGAAATCGAAAAAAAACTTCATGCTTCAGGGAT TTCTGTTACAGAAATCTCCGTAACGCCAACAAACTTTAAAACACGTATCCAACAAGCAATTGATAAACACCCTTCAGCGA TTTTTATTCCCTTTTCTTCGTTATCTTATAAGCAAGGAACAACATTTATTGAAGAAATCCTTAAAGAAAAAATCCCTGTA ATTACCGATGATTTTTCTCTAGTAGCTGAAGGAGCTTGCGTTGCCTGTGGTGTAGATTTTAAAAAATCCGGGCAGCAAGC AGCTCAAATGGTCTATCACTTACTCAACCGACATCAAGATATCGAAGGGTTGAAAAAAATCATTGCCGAGCCTCTACCTC AAACAACGACATTCAACGAAGACGTCATCCGTCGTCTAGGATTGAAAATCAACAAAACAGAACGTAAACAATTCCGTTCT ATCATCTTTAAAGATAATAAAGATAAGAAAGCTGCTGTGAAAAACGATAAACCTGAAACTGAAAAAAACTGCAGTCTTGC TTAA
Upstream 100 bases:
>100_bases GATACGTTCGCTTTTCTTCTTTAGGAAAATCGGAAAATATCGTTGCAGCCTGCCAACGCTTAAGCCAAACGTCTGTATAT GATAGAACGGTGTTATCACT
Downstream 100 bases:
>100_bases AAGCCTTTCTCCCGCCACCCAGAAATTATGGATTCCGCGGCTTTCGGCAATAAGAGTCTTTTTTTTCTGGAAGAGTCTCC TGAAATTAACGTCACATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MILRKIAQYAFFLSLICSFIAVVISSPNPEQGSPKVAVFLSFSHSILEDCSQSCIEVLKSLENSPEVLVVNAEDSVVKAR KIARLLHSDQNIVAIVTLGSIATKIMSQIETKKPIIYAAVPDGETLAFSKKQTNIYGVNDTLDINQCCFAIQAVRTNAES LVYIKPVEPFPSALQKEIEKKLHASGISVTEISVTPTNFKTRIQQAIDKHPSAIFIPFSSLSYKQGTTFIEEILKEKIPV ITDDFSLVAEGACVACGVDFKKSGQQAAQMVYHLLNRHQDIEGLKKIIAEPLPQTTTFNEDVIRRLGLKINKTERKQFRS IIFKDNKDKKAAVKNDKPETEKNCSLA
Sequences:
>Translated_347_residues MILRKIAQYAFFLSLICSFIAVVISSPNPEQGSPKVAVFLSFSHSILEDCSQSCIEVLKSLENSPEVLVVNAEDSVVKAR KIARLLHSDQNIVAIVTLGSIATKIMSQIETKKPIIYAAVPDGETLAFSKKQTNIYGVNDTLDINQCCFAIQAVRTNAES LVYIKPVEPFPSALQKEIEKKLHASGISVTEISVTPTNFKTRIQQAIDKHPSAIFIPFSSLSYKQGTTFIEEILKEKIPV ITDDFSLVAEGACVACGVDFKKSGQQAAQMVYHLLNRHQDIEGLKKIIAEPLPQTTTFNEDVIRRLGLKINKTERKQFRS IIFKDNKDKKAAVKNDKPETEKNCSLA >Mature_347_residues MILRKIAQYAFFLSLICSFIAVVISSPNPEQGSPKVAVFLSFSHSILEDCSQSCIEVLKSLENSPEVLVVNAEDSVVKAR KIARLLHSDQNIVAIVTLGSIATKIMSQIETKKPIIYAAVPDGETLAFSKKQTNIYGVNDTLDINQCCFAIQAVRTNAES LVYIKPVEPFPSALQKEIEKKLHASGISVTEISVTPTNFKTRIQQAIDKHPSAIFIPFSSLSYKQGTTFIEEILKEKIPV ITDDFSLVAEGACVACGVDFKKSGQQAAQMVYHLLNRHQDIEGLKKIIAEPLPQTTTFNEDVIRRLGLKINKTERKQFRS IIFKDNKDKKAAVKNDKPETEKNCSLA
Specific function: Unknown
COG id: COG2984
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38458; Mature: 38458
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRKIAQYAFFLSLICSFIAVVISSPNPEQGSPKVAVFLSFSHSILEDCSQSCIEVLKS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH LENSPEVLVVNAEDSVVKARKIARLLHSDQNIVAIVTLGSIATKIMSQIETKKPIIYAAV HCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEC PDGETLAFSKKQTNIYGVNDTLDINQCCFAIQAVRTNAESLVYIKPVEPFPSALQKEIEK CCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH KLHASGISVTEISVTPTNFKTRIQQAIDKHPSAIFIPFSSLSYKQGTTFIEEILKEKIPV HHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCE ITDDFSLVAEGACVACGVDFKKSGQQAAQMVYHLLNRHQDIEGLKKIIAEPLPQTTTFNE EECCHHHHHCCCEEEECCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCH DVIRRLGLKINKTERKQFRSIIFKDNKDKKAAVKNDKPETEKNCSLA HHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MILRKIAQYAFFLSLICSFIAVVISSPNPEQGSPKVAVFLSFSHSILEDCSQSCIEVLKS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH LENSPEVLVVNAEDSVVKARKIARLLHSDQNIVAIVTLGSIATKIMSQIETKKPIIYAAV HCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEC PDGETLAFSKKQTNIYGVNDTLDINQCCFAIQAVRTNAESLVYIKPVEPFPSALQKEIEK CCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH KLHASGISVTEISVTPTNFKTRIQQAIDKHPSAIFIPFSSLSYKQGTTFIEEILKEKIPV HHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCE ITDDFSLVAEGACVACGVDFKKSGQQAAQMVYHLLNRHQDIEGLKKIIAEPLPQTTTFNE EECCHHHHHCCCEEEECCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCH DVIRRLGLKINKTERKQFRSIIFKDNKDKKAAVKNDKPETEKNCSLA HHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA