| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89897919
Identifier: 89897919
GI number: 89897919
Start: 129333
End: 129860
Strand: Direct
Name: 89897919
Synonym: CF0112
Alternate gene names: NA
Gene position: 129333-129860 (Clockwise)
Preceding gene: 89897918
Following gene: 89897921
Centisome position: 11.09
GC content: 38.83
Gene sequence:
>528_bases ATGGCAGGATTAGTTTTTGTAATCATTTTTAGCGTATTGTTGGGAGCCTGTCTCGGGGCGTATTGTCAACTATATTATCT CGTAAAAAACATTATGTTTTCTTGGGAGGCTCTCCTTTCCCATGCCATTGCCAAACGTAGGGCCCTCCTTTCTCTGTCTA TTTTAGGGAAGTTAACTATCCCTCGTTTATCTCAGGAAACAGAGTTTTTATGTCAGCATCATAAGATTTCTTGGAGAATT TTTTTAAAACACAGCTACGATATCCTTTTTGCTTTTCAAGAAATGGAAGAAACTCTTCCTCAGCTTGTTCAGGAGATATT AGAAGCTGTGGGGGAAAATCATGAGCAAGAATCAATTGTGAGATCTTTAGAAGATTTTTGGGCTAGGGATAATCTTTTTG CTTTTGAGACTTCTGCGTATGAGCAAGCTGTTGAGAAATACTTAAAGCAAAGATCAAGCGCATCGTTATGGGTGGCTTCG AGGATGTTTCGTTTTTTAGACCTCCCTATGATTCATTTCTCTCGCTAA
Upstream 100 bases:
>100_bases TCTTCGCTACGGGGAATATCGCGAGCTTACCGATGCCGAGATCCTTACCTACATGTAGCCCCTGTTGCTTTTTTATCATT AGTGAGCCATATGTAGCCCT
Downstream 100 bases:
>100_bases GATTTTCGGAAATTTTTGTAAAATCCCTTGCTTTACGTGCTCAATAAGTTTATCGCGAATCTCTTCGAGATCAATGGTAT GATTTAAAAGTATAGATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAGLVFVIIFSVLLGACLGAYCQLYYLVKNIMFSWEALLSHAIAKRRALLSLSILGKLTIPRLSQETEFLCQHHKISWRI FLKHSYDILFAFQEMEETLPQLVQEILEAVGENHEQESIVRSLEDFWARDNLFAFETSAYEQAVEKYLKQRSSASLWVAS RMFRFLDLPMIHFSR
Sequences:
>Translated_175_residues MAGLVFVIIFSVLLGACLGAYCQLYYLVKNIMFSWEALLSHAIAKRRALLSLSILGKLTIPRLSQETEFLCQHHKISWRI FLKHSYDILFAFQEMEETLPQLVQEILEAVGENHEQESIVRSLEDFWARDNLFAFETSAYEQAVEKYLKQRSSASLWVAS RMFRFLDLPMIHFSR >Mature_174_residues AGLVFVIIFSVLLGACLGAYCQLYYLVKNIMFSWEALLSHAIAKRRALLSLSILGKLTIPRLSQETEFLCQHHKISWRIF LKHSYDILFAFQEMEETLPQLVQEILEAVGENHEQESIVRSLEDFWARDNLFAFETSAYEQAVEKYLKQRSSASLWVASR MFRFLDLPMIHFSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20428; Mature: 20297
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLVFVIIFSVLLGACLGAYCQLYYLVKNIMFSWEALLSHAIAKRRALLSLSILGKLTI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRLSQETEFLCQHHKISWRIFLKHSYDILFAFQEMEETLPQLVQEILEAVGENHEQESIV CCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RSLEDFWARDNLFAFETSAYEQAVEKYLKQRSSASLWVASRMFRFLDLPMIHFSR HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure AGLVFVIIFSVLLGACLGAYCQLYYLVKNIMFSWEALLSHAIAKRRALLSLSILGKLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRLSQETEFLCQHHKISWRIFLKHSYDILFAFQEMEETLPQLVQEILEAVGENHEQESIV CCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RSLEDFWARDNLFAFETSAYEQAVEKYLKQRSSASLWVASRMFRFLDLPMIHFSR HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA