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The map label for this gene is 89885970

Identifier: 89885970

GI number: 89885970

Start: 241319

End: 241912

Strand: Reverse

Name: 89885970

Synonym: Rfer_4485

Alternate gene names: NA

Gene position: 241912-241319 (Counterclockwise)

Preceding gene: 89885971

Following gene: 89885949

Centisome position: 93.97

GC content: 56.4

Gene sequence:

>594_bases
ATGCAATTAGCTTTCGCATCCAACCATGAAATCAATGCTTCAACGGTGGGCAAGATGATGCCAGGCAATGGCAACCCAGC
GCGCGGGCGGGTACGGCCACGCGCGGTGACAAGCGACCGGTATGGGCAATGGTCCCCCGACATGATCGACCGTGAGAAAT
TTCACCGCAATCGTCATGTTTCAAGTCTGCACGGTGTTCAAGCCGAAAAGGCGCGCCTGCTGTATGAAGCCTATGCATAC
CTGCATTTCAAACGGTTCAACACGAAGCCAATCGATTGCATCATGCAAATGGTCTCCGCAGACGGCATGTATCGCGTGCC
CCGGCAAACGGTCAACGAAGACGGCGCCGAGATTTTGCTGCCGATCGGCCTGTTTGGCATGCCATTCGAACAGGCATTCT
GCGAATTTTGCAATGACATGGAGGCCCTGTACGCCGAGGGCGGCAAACAGCGGCTGGCGTGGGCGCAAAAGGGCATGAAC
TGCCACCGCGCGGAGATTTTGGAGCAAGCAATGCGGTCTTTTTCGCCAATGGCCCAATTTGGTGAGCGCTGGCATTCACT
GCAAAATCACGGTGAGCTGGCGCTGGCGGCGTAG

Upstream 100 bases:

>100_bases
AACAACTCGACCTAATCGCGCACACGAAGCCCACCACGGCAAGCAAAGCTGCAGGTGGGAGCGCCTGCAGCAACTTGGTG
CAGAACTAGAGGACTTTGAC

Downstream 100 bases:

>100_bases
ACAAGCTCTGCCGTGAATGACCAATCATGGCATCGGCCATCCCGCCAGGCCGGTGCCGGCGCGTCACCCACTTTCAGTAG
GGGACTCCGCGCCTTCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MQLAFASNHEINASTVGKMMPGNGNPARGRVRPRAVTSDRYGQWSPDMIDREKFHRNRHVSSLHGVQAEKARLLYEAYAY
LHFKRFNTKPIDCIMQMVSADGMYRVPRQTVNEDGAEILLPIGLFGMPFEQAFCEFCNDMEALYAEGGKQRLAWAQKGMN
CHRAEILEQAMRSFSPMAQFGERWHSLQNHGELALAA

Sequences:

>Translated_197_residues
MQLAFASNHEINASTVGKMMPGNGNPARGRVRPRAVTSDRYGQWSPDMIDREKFHRNRHVSSLHGVQAEKARLLYEAYAY
LHFKRFNTKPIDCIMQMVSADGMYRVPRQTVNEDGAEILLPIGLFGMPFEQAFCEFCNDMEALYAEGGKQRLAWAQKGMN
CHRAEILEQAMRSFSPMAQFGERWHSLQNHGELALAA
>Mature_197_residues
MQLAFASNHEINASTVGKMMPGNGNPARGRVRPRAVTSDRYGQWSPDMIDREKFHRNRHVSSLHGVQAEKARLLYEAYAY
LHFKRFNTKPIDCIMQMVSADGMYRVPRQTVNEDGAEILLPIGLFGMPFEQAFCEFCNDMEALYAEGGKQRLAWAQKGMN
CHRAEILEQAMRSFSPMAQFGERWHSLQNHGELALAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22410; Mature: 22410

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLAFASNHEINASTVGKMMPGNGNPARGRVRPRAVTSDRYGQWSPDMIDREKFHRNRHV
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SSLHGVQAEKARLLYEAYAYLHFKRFNTKPIDCIMQMVSADGMYRVPRQTVNEDGAEILL
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCHHHCCCCCCEEEE
PIGLFGMPFEQAFCEFCNDMEALYAEGGKQRLAWAQKGMNCHRAEILEQAMRSFSPMAQF
ECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
GERWHSLQNHGELALAA
HHHHHHHHCCCCEEECC
>Mature Secondary Structure
MQLAFASNHEINASTVGKMMPGNGNPARGRVRPRAVTSDRYGQWSPDMIDREKFHRNRHV
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SSLHGVQAEKARLLYEAYAYLHFKRFNTKPIDCIMQMVSADGMYRVPRQTVNEDGAEILL
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCHHHCCCCCCEEEE
PIGLFGMPFEQAFCEFCNDMEALYAEGGKQRLAWAQKGMNCHRAEILEQAMRSFSPMAQF
ECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
GERWHSLQNHGELALAA
HHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA