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The map label for this gene is 89885949

Identifier: 89885949

GI number: 89885949

Start: 216907

End: 217554

Strand: Reverse

Name: 89885949

Synonym: Rfer_4463

Alternate gene names: NA

Gene position: 217554-216907 (Counterclockwise)

Preceding gene: 89885970

Following gene: 89885948

Centisome position: 84.5

GC content: 60.34

Gene sequence:

>648_bases
ATGTCGGAACTTGGCCGGGATTTGGACTCGAAGTTGGTGCTGCACTGTCCTTACTGTGGGGGCAAGGGCGAACTCAAGCC
GGGCGACCGCGTTTGGCCTGGCAAGGGGCACCCCGCGCTGTACGTGTGCGAAAACTACCCGGTCTGCGATACCTATGTGC
GCTGCCATGCAGGCACAGAAATTCCGCTGGGCACCATGGCGGGCAAGCGCCTCAGGCGCTTGAGAACGATTGCCCACGAC
CAGTTTGACCCCATCTGGAAAGACACCGACAACGAGCTCGGCCGGTCAGCGGCCTATCAAGCTGCGGCACGGGTCATGGA
CGCGCAGGGCGAGTTCCACATTGGCAGCCTGGACGAACGGGGCTGCGAGTTATTTATCGAACACATCCACGCCGTTGAAT
TGGAAATGGACCGGCTGCTGGTTGAGCACGCGCAACGGGGGGCGCCCCCCGGTTCGGTCACACTGGAAATCCTTCAAGTC
CTGTTCCACCCTGATCGCGACACCTTTTTGAACGAAATCGCCCTGAGCGACATTAGCGGTTATGAACGTGAGTGGCTAGA
TGCCCAACGTTGCGGGCTGGTGGTCCAGGATGGGCTCAGAGTCAGGCTTTCGCCCAAGGGTAGAACGGCTTGCTTGTCGG
CCCTGTAG

Upstream 100 bases:

>100_bases
AAACCCACCGGAAACGGCACCGAAATTCATTTTTTTCTCAAACTTCAAGGGAGCGGATCAATCCTGAACAAAAATGGCCT
CCTAAACCATGGATTGAAGA

Downstream 100 bases:

>100_bases
CTCAAAAACAATTCAAATCGCATTTCCAGCGATAGAATGAATTTTTCGCACCGCGCGAATTCGTCGCCCAAACCCATTTG
CAACAATGGATTTAAGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSELGRDLDSKLVLHCPYCGGKGELKPGDRVWPGKGHPALYVCENYPVCDTYVRCHAGTEIPLGTMAGKRLRRLRTIAHD
QFDPIWKDTDNELGRSAAYQAAARVMDAQGEFHIGSLDERGCELFIEHIHAVELEMDRLLVEHAQRGAPPGSVTLEILQV
LFHPDRDTFLNEIALSDISGYEREWLDAQRCGLVVQDGLRVRLSPKGRTACLSAL

Sequences:

>Translated_215_residues
MSELGRDLDSKLVLHCPYCGGKGELKPGDRVWPGKGHPALYVCENYPVCDTYVRCHAGTEIPLGTMAGKRLRRLRTIAHD
QFDPIWKDTDNELGRSAAYQAAARVMDAQGEFHIGSLDERGCELFIEHIHAVELEMDRLLVEHAQRGAPPGSVTLEILQV
LFHPDRDTFLNEIALSDISGYEREWLDAQRCGLVVQDGLRVRLSPKGRTACLSAL
>Mature_214_residues
SELGRDLDSKLVLHCPYCGGKGELKPGDRVWPGKGHPALYVCENYPVCDTYVRCHAGTEIPLGTMAGKRLRRLRTIAHDQ
FDPIWKDTDNELGRSAAYQAAARVMDAQGEFHIGSLDERGCELFIEHIHAVELEMDRLLVEHAQRGAPPGSVTLEILQVL
FHPDRDTFLNEIALSDISGYEREWLDAQRCGLVVQDGLRVRLSPKGRTACLSAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23991; Mature: 23859

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELGRDLDSKLVLHCPYCGGKGELKPGDRVWPGKGHPALYVCENYPVCDTYVRCHAGTE
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHEECCCCC
IPLGTMAGKRLRRLRTIAHDQFDPIWKDTDNELGRSAAYQAAARVMDAQGEFHIGSLDER
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHH
GCELFIEHIHAVELEMDRLLVEHAQRGAPPGSVTLEILQVLFHPDRDTFLNEIALSDISG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
YEREWLDAQRCGLVVQDGLRVRLSPKGRTACLSAL
HHHHHHHHHHCCEEEECCEEEEECCCCCCHHHHCC
>Mature Secondary Structure 
SELGRDLDSKLVLHCPYCGGKGELKPGDRVWPGKGHPALYVCENYPVCDTYVRCHAGTE
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHEECCCCC
IPLGTMAGKRLRRLRTIAHDQFDPIWKDTDNELGRSAAYQAAARVMDAQGEFHIGSLDER
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHH
GCELFIEHIHAVELEMDRLLVEHAQRGAPPGSVTLEILQVLFHPDRDTFLNEIALSDISG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
YEREWLDAQRCGLVVQDGLRVRLSPKGRTACLSAL
HHHHHHHHHHCCEEEECCEEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA