Click here to switch to the map view.

The map label for this gene is ybgL [C]

Identifier: 89255595

GI number: 89255595

Start: 165112

End: 165729

Strand: Reverse

Name: ybgL [C]

Synonym: FTL_0160

Alternate gene names: 89255595

Gene position: 165729-165112 (Counterclockwise)

Preceding gene: 89255596

Following gene: 89255594

Centisome position: 8.74

GC content: 34.79

Gene sequence:

>618_bases
ATGCTTTTAATAAATTGTGATTTAGGAGAGCGGGGTGTTGCTCATCCTATTGATGATAGGCTTGTTGACTACATTGACAT
AGCAAATATAGCTTGTGGAGGTCATGCGGGAGATAAGGCAAGTGTTGATTACTATGTAAATCTTTGTAAAGGGAAAAATG
TCAAAATTACGGCGCATATATCTTATCCATATAAGCAAAATTTTGGTAGAAAAGTGATTGATATTGATTATAATGTTTTA
TGTGAGTCTTTTGATCAACAATTTGCATTATTTGATAGTGAGATTAAAGCTATAAAGCCACACGGAGTTTTATATAATCA
GTTAAATGTCGATCAAGAACTAGCAAAAACTTTCATACAATGGTGTATTAAAAATAATATAGATGAGCTGCTTGTTAGCC
CCTTTGGAGTGGTTGCTGAATATGCTAAAGATAAGGGCATAAAGACTATCAAAGAGAGCTTTGCTGAAAGAGGTTATATG
CTCGATAATCATAATAATCCTATGCTAATACCGAGAGGTCAGCCAAATGCTGAGATTGAAGATGTGGCATTGGCTGTAGC
GCAGTATAATCAGCTCAAACAAGGGTTTGTTAAAATTGCTGGTGAGGATTGCTTTTAA

Upstream 100 bases:

>100_bases
CAGAGCAGTCACCTAGTGGCTGGAATATTATTGTGGTATCTGATTTCAAAGATTTTGCTAAATTTAGTGCAGGCGACAAA
ATAATTTTTAGGGAGAAATA

Downstream 100 bases:

>100_bases
ATCTCAAACTATATGTATACATTCAGATAGTAGTATAGCCTTAGAGTTAGCACAAGAGTTGTATAAAAATAAAGGTTAAG
CTTATGCTAGATATTTTGTC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHISYPYKQNFGRKVIDIDYNVL
CESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQWCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYM
LDNHNNPMLIPRGQPNAEIEDVALAVAQYNQLKQGFVKIAGEDCF

Sequences:

>Translated_205_residues
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHISYPYKQNFGRKVIDIDYNVL
CESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQWCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYM
LDNHNNPMLIPRGQPNAEIEDVALAVAQYNQLKQGFVKIAGEDCF
>Mature_205_residues
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHISYPYKQNFGRKVIDIDYNVL
CESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQWCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYM
LDNHNNPMLIPRGQPNAEIEDVALAVAQYNQLKQGFVKIAGEDCF

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=209, Percent_Identity=35.4066985645933, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 23021; Mature: 23021

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHI
CEEEECCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCEEEEEEE
SYPYKQNFGRKVIDIDYNVLCESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQ
ECCHHHCCCCEEEECCHHHHHHHHHHHHHHHHCHHHEECCCCEEEHHCCCCHHHHHHHHH
WCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYMLDNHNNPMLIPRGQPNAEIE
HHHHCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCHH
DVALAVAQYNQLKQGFVKIAGEDCF
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHI
CEEEECCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCEEEEEEE
SYPYKQNFGRKVIDIDYNVLCESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQ
ECCHHHCCCCEEEECCHHHHHHHHHHHHHHHHCHHHEECCCCEEEHHCCCCHHHHHHHHH
WCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYMLDNHNNPMLIPRGQPNAEIE
HHHHCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCHH
DVALAVAQYNQLKQGFVKIAGEDCF
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]