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The map label for this gene is ybgK [C]

Identifier: 89255594

GI number: 89255594

Start: 164216

End: 165028

Strand: Reverse

Name: ybgK [C]

Synonym: FTL_0159

Alternate gene names: 89255594

Gene position: 165028-164216 (Counterclockwise)

Preceding gene: 89255595

Following gene: 89255592

Centisome position: 8.7

GC content: 36.04

Gene sequence:

>813_bases
ATGCTAGATATTTTGTCAATAAAAGGTGGTTTAGTCTTTGCTGTTTCGCTACGTCAATATGGCTTACAAGATAAGGGGAT
ATCACCTCAAGTAGCGCAAGATCAGCTTAGTTTTATTACAGCGTATAATCTTGTTGGTAAACCTACTAATTTCCAAGCTG
TAGAAATGATCTATCCAGCAGAAATTACAGCTAACCAAGATGCTTTAGTTTGCCTATCTGGAGCTAGCTATCAAGATACT
TATATAGATGCCCATGAAAAAGTCAGCTATAACCAAGTTTTCATGCTTAACAAAGGACAGAAATTAGAGTTTAAAGGAAT
AAAGAAAGGTTTTCGTACAGTAGTTTTAGCAGTTAAAGCAGAGTCTAAAATACAAGACTTAGTAGCTAATACAAGATCAC
CACAGCTTGCAAGTTATATAAGCGAGACTTACCGCAATAACCTAATAAGAATACTTAAAGGTCCAGAGTACAATATCCTA
AAAGATAAGTCCTTTCTTGAAAACTCTTGGGCAATTTCAGTAAATTCTAGTCAGATGGGCTTGTCATTAGAGGGAGTTGC
TCTTGATACACAAAAAATTGAAATGATTTCCCAGCCTGTAACAGATGGCACAATACAATTAGCCCCAAGTGGTCCGATAG
TGTTGCTAAGACATCGTCAAACAGTTGGTGGCTATCCATGTATTGCCAATGTTATTGAAGCAGATATCAGCAAATTATCA
CAATATACACCGGGCTCTAAAATAAGATTTAAGTTAGTAAGTTTAGAAGAGGCGATAAGCGAAAATACTAGATTAAGGCA
ATTTACCGAGTAA

Upstream 100 bases:

>100_bases
GTGAGGATTGCTTTTAAATCTCAAACTATATGTATACATTCAGATAGTAGTATAGCCTTAGAGTTAGCACAAGAGTTGTA
TAAAAATAAAGGTTAAGCTT

Downstream 100 bases:

>100_bases
ATATTTTTAGTTTAATTTATCCACTACTAATCCTGTCTTAGGGTCTAAAATCAGTTTTGGTGTTTTTTGTTTTTTATTAA
AATCAAACATGTTTAAGATA

Product: hydrolase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLDILSIKGGLVFAVSLRQYGLQDKGISPQVAQDQLSFITAYNLVGKPTNFQAVEMIYPAEITANQDALVCLSGASYQDT
YIDAHEKVSYNQVFMLNKGQKLEFKGIKKGFRTVVLAVKAESKIQDLVANTRSPQLASYISETYRNNLIRILKGPEYNIL
KDKSFLENSWAISVNSSQMGLSLEGVALDTQKIEMISQPVTDGTIQLAPSGPIVLLRHRQTVGGYPCIANVIEADISKLS
QYTPGSKIRFKLVSLEEAISENTRLRQFTE

Sequences:

>Translated_270_residues
MLDILSIKGGLVFAVSLRQYGLQDKGISPQVAQDQLSFITAYNLVGKPTNFQAVEMIYPAEITANQDALVCLSGASYQDT
YIDAHEKVSYNQVFMLNKGQKLEFKGIKKGFRTVVLAVKAESKIQDLVANTRSPQLASYISETYRNNLIRILKGPEYNIL
KDKSFLENSWAISVNSSQMGLSLEGVALDTQKIEMISQPVTDGTIQLAPSGPIVLLRHRQTVGGYPCIANVIEADISKLS
QYTPGSKIRFKLVSLEEAISENTRLRQFTE
>Mature_270_residues
MLDILSIKGGLVFAVSLRQYGLQDKGISPQVAQDQLSFITAYNLVGKPTNFQAVEMIYPAEITANQDALVCLSGASYQDT
YIDAHEKVSYNQVFMLNKGQKLEFKGIKKGFRTVVLAVKAESKIQDLVANTRSPQLASYISETYRNNLIRILKGPEYNIL
KDKSFLENSWAISVNSSQMGLSLEGVALDTQKIEMISQPVTDGTIQLAPSGPIVLLRHRQTVGGYPCIANVIEADISKLS
QYTPGSKIRFKLVSLEEAISENTRLRQFTE

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=287, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 29902; Mature: 29902

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDILSIKGGLVFAVSLRQYGLQDKGISPQVAQDQLSFITAYNLVGKPTNFQAVEMIYPA
CCEEEEECCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
EITANQDALVCLSGASYQDTYIDAHEKVSYNQVFMLNKGQKLEFKGIKKGFRTVVLAVKA
EECCCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEECCCCEEEHHHHHHCCEEEEEEEEC
ESKIQDLVANTRSPQLASYISETYRNNLIRILKGPEYNILKDKSFLENSWAISVNSSQMG
HHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCEECCCHHHCCCEEEEECCCCCC
LSLEGVALDTQKIEMISQPVTDGTIQLAPSGPIVLLRHRQTVGGYPCIANVIEADISKLS
EEEECEEECHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
QYTPGSKIRFKLVSLEEAISENTRLRQFTE
HCCCCCCEEEEEEEHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MLDILSIKGGLVFAVSLRQYGLQDKGISPQVAQDQLSFITAYNLVGKPTNFQAVEMIYPA
CCEEEEECCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
EITANQDALVCLSGASYQDTYIDAHEKVSYNQVFMLNKGQKLEFKGIKKGFRTVVLAVKA
EECCCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEECCCCEEEHHHHHHCCEEEEEEEEC
ESKIQDLVANTRSPQLASYISETYRNNLIRILKGPEYNILKDKSFLENSWAISVNSSQMG
HHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCEECCCHHHCCCEEEEECCCCCC
LSLEGVALDTQKIEMISQPVTDGTIQLAPSGPIVLLRHRQTVGGYPCIANVIEADISKLS
EEEECEEECHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
QYTPGSKIRFKLVSLEEAISENTRLRQFTE
HCCCCCCEEEEEEEHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]