Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056666

Identifier: 89056666

GI number: 89056666

Start: 4284396

End: 4285406

Strand: Direct

Name: 89056666

Synonym: Jann_4175

Alternate gene names: NA

Gene position: 4284396-4285406 (Clockwise)

Preceding gene: 89056665

Following gene: 89056667

Centisome position: 99.22

GC content: 59.64

Gene sequence:

>1011_bases
ATGAGTATTGCCACCTATTCCGACGCAGCGCAGTTCCAACTCCTTCGGCGCGACGCCACGCAGCATCGTGCCGATCTCGC
GCGTCTAACATCGGAGCTATCGTCGGGCCGGGTCGCGGACCTTGGACAGGCTCTCCAGGGGGACTACTCCACCCTCTCGG
ACATAACGCGCAGCTTGCGCCTGAATACGACTTTCATCACGTCCGTGTCCGAGGCTGCAATTGCTGTCGGCGTCCGTCAA
AGTGCCCTCGAAAGAGTAGCGTCCGAGCTGGAAGGTTACGGATCCTCTCTTCTGGCTGTGACGGGTGCAGGTAGTTTGTC
GGATATTCAACTCAAATTGGCAGATGCCCCAGCGCGTTTCGACCAAGCCGTGGATAGCCTAAACACACGCCTCGCCGGTC
GCAGCCTCTTTTCCGCCGACGATCCGAATGCAACACCACTTATCAGCTCAGAAGATATGTTGGCTGAACTCAGAACGGTT
GCCGCCGGTGCGCTCGACGCCGCCACTGCGGTGGCCGACGTCACAGCTTGGTTCATGGATACTGGCGGAGGGTATGAGAC
ACTGGCCTGGCAAGGCGGTACGGGCGATCCGCCTCCTGTCCTGATAGGCGAGGGTCAATCAGCTGAAACCGGTGTCACGG
CTTTGAACCCCGCCATCCGCGAAACTTTGGCCAGCCTTGCACTGGCAGTTCTCGCGTCAGAAGAGGTACCAGCCTCTGCG
GAGCAAGAGAAACGCGCATTCGTCGCGTCCGCCGCCGAACAAGTGCTGCGTGCCGAGAGCAATTTGATTGGCCTCCGCGC
GCGTCTCGGCACTGAAGAAGCACGCGTTGAAGACGCAAGGGTCACCGCCGAAGCGACCCGTGCCAGCTTGCAAATCGAGT
ACGGACGGTTGGTTGAAGCTGATCCCTACGACACGGCAACGGAATTGGAGGCTATCTCTCTCCGTCTCGAAAGCCTGTAT
ATTGTGACCGCGCGCGTCTCGCGCTTGAGCTTGACGGAGTACCTCAGGTGA

Upstream 100 bases:

>100_bases
AGCTGCAACGCCTTTTGCAGATTGAGCAGATGTATGCCGCCAACGCACGTGTGATCAACGTGGCCGGGCAAATGATGGAT
GAACTTCTGAGGATTGCAGG

Downstream 100 bases:

>100_bases
TCCGGATATTCTCATTTTTCCTCGTGGCTTGCATTTTCGCGACCGCAGCTGTCGCAACTCCAATCCGGATAAAGGATTTG
GTGGAGTTCGATGGTGTGCG

Product: flagellar hook-associated protein FlgL family protein

Products: NA

Alternate protein names: Flagellar Hook-Associated Protein; Flagellar Hook-Associated Protein FlgL; Flagellin And Related Hook-Associated Protein

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLRLNTTFITSVSEAAIAVGVRQ
SALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARFDQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTV
AAGALDAATAVADVTAWFMDTGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASA
EQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEADPYDTATELEAISLRLESLY
IVTARVSRLSLTEYLR

Sequences:

>Translated_336_residues
MSIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLRLNTTFITSVSEAAIAVGVRQ
SALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARFDQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTV
AAGALDAATAVADVTAWFMDTGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASA
EQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEADPYDTATELEAISLRLESLY
IVTARVSRLSLTEYLR
>Mature_335_residues
SIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLRLNTTFITSVSEAAIAVGVRQS
ALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARFDQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTVA
AGALDAATAVADVTAWFMDTGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASAE
QEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEADPYDTATELEAISLRLESLYI
VTARVSRLSLTEYLR

Specific function: Unknown

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35496; Mature: 35365

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
LNTTFITSVSEAAIAVGVRQSALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCHHH
DQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTVAAGALDAATAVADVTAWFMD
HHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASA
CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCH
EQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEA
HHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEC
DPYDTATELEAISLRLESLYIVTARVSRLSLTEYLR
CCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCC
>Mature Secondary Structure 
SIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
LNTTFITSVSEAAIAVGVRQSALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCHHH
DQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTVAAGALDAATAVADVTAWFMD
HHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASA
CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCH
EQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEA
HHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEC
DPYDTATELEAISLRLESLYIVTARVSRLSLTEYLR
CCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA