Click here to switch to the map view.

The map label for this gene is 89056660

Identifier: 89056660

GI number: 89056660

Start: 4278668

End: 4279273

Strand: Direct

Name: 89056660

Synonym: Jann_4169

Alternate gene names: NA

Gene position: 4278668-4279273 (Clockwise)

Preceding gene: 89056659

Following gene: 89056661

Centisome position: 99.09

GC content: 65.51

Gene sequence:

>606_bases
ATGACCCGGTTTCTTGCACTTGGCATCGCCGTTCTGGGCGCGACCACCGTCGCCCTGGCCGAAGATGTGGTCATTGACCC
GCCCGAAGACGTCTCCATCGCCGAAGGCCTCGCGGCGTTTGACCGGATCTATGAGGTCACGTCGCACCCGCGCTGCTCCA
GCTGCCACGTGGGGGCCGATAATCGCCCGATGTGGACCGGGCCGTCCTATGGGCGCACGCGGCCCCATGGGATGAACATC
AACGCTGGCGAAAGCCGGATCGGGGCGGAGTACGTGACCTGCTCCACCTGCCATGCCTATCGCGAGGACGGGGCGAACGA
TGCGCCGCATATGGCACCGCAAGTCTCCATGACGTGGCAGTTGCCCCCGGTTGAGGCCGAATGGTTCGGCCGCAGCGCCG
GCGAGATCTGCGCACAGCTGCGCGATCCAGAGCGCAACGGAGACCGCGACTACATCGCGTTGGCAGGCCATCTGGAACAT
GACCTGATCCTCCATTGGGCCTGGACACCTGGCGGCGGGAGGGAGCCTGCACCCTACTCGCTGCAAGAGCATGTGGACGA
TATTCTGGCGTGGGGCGTGGCAGGCTACCCCTGCCGCGACGATTGA

Upstream 100 bases:

>100_bases
TGCTCCTCCGGCGCTGGCCAACGCGATCTTCGCGGCCACCGGTCAGCGCATCCGAGAGATGCCGTTCTGGAACCACATTG
ATTTCGTCTGAGAGGCAGCC

Downstream 100 bases:

>100_bases
TATGGACCGTCGATACCGTCCCCCCGCCGCCTTTGCCGCCACAAGCGCGGTCTTGCATGTCGCGGCTTTGCTGCTGTCTG
GATTTGCCGCAAACCCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTRFLALGIAVLGATTVALAEDVVIDPPEDVSIAEGLAAFDRIYEVTSHPRCSSCHVGADNRPMWTGPSYGRTRPHGMNI
NAGESRIGAEYVTCSTCHAYREDGANDAPHMAPQVSMTWQLPPVEAEWFGRSAGEICAQLRDPERNGDRDYIALAGHLEH
DLILHWAWTPGGGREPAPYSLQEHVDDILAWGVAGYPCRDD

Sequences:

>Translated_201_residues
MTRFLALGIAVLGATTVALAEDVVIDPPEDVSIAEGLAAFDRIYEVTSHPRCSSCHVGADNRPMWTGPSYGRTRPHGMNI
NAGESRIGAEYVTCSTCHAYREDGANDAPHMAPQVSMTWQLPPVEAEWFGRSAGEICAQLRDPERNGDRDYIALAGHLEH
DLILHWAWTPGGGREPAPYSLQEHVDDILAWGVAGYPCRDD
>Mature_200_residues
TRFLALGIAVLGATTVALAEDVVIDPPEDVSIAEGLAAFDRIYEVTSHPRCSSCHVGADNRPMWTGPSYGRTRPHGMNIN
AGESRIGAEYVTCSTCHAYREDGANDAPHMAPQVSMTWQLPPVEAEWFGRSAGEICAQLRDPERNGDRDYIALAGHLEHD
LILHWAWTPGGGREPAPYSLQEHVDDILAWGVAGYPCRDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21953; Mature: 21821

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFLALGIAVLGATTVALAEDVVIDPPEDVSIAEGLAAFDRIYEVTSHPRCSSCHVGAD
CCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NRPMWTGPSYGRTRPHGMNINAGESRIGAEYVTCSTCHAYREDGANDAPHMAPQVSMTWQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEE
LPPVEAEWFGRSAGEICAQLRDPERNGDRDYIALAGHLEHDLILHWAWTPGGGREPAPYS
CCCCCHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCC
LQEHVDDILAWGVAGYPCRDD
HHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TRFLALGIAVLGATTVALAEDVVIDPPEDVSIAEGLAAFDRIYEVTSHPRCSSCHVGAD
CHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NRPMWTGPSYGRTRPHGMNINAGESRIGAEYVTCSTCHAYREDGANDAPHMAPQVSMTWQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEE
LPPVEAEWFGRSAGEICAQLRDPERNGDRDYIALAGHLEHDLILHWAWTPGGGREPAPYS
CCCCCHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCC
LQEHVDDILAWGVAGYPCRDD
HHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA