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The map label for this gene is pcaC [H]

Identifier: 89056653

GI number: 89056653

Start: 4272802

End: 4273176

Strand: Direct

Name: pcaC [H]

Synonym: Jann_4162

Alternate gene names: 89056653

Gene position: 4272802-4273176 (Clockwise)

Preceding gene: 89056652

Following gene: 89056654

Centisome position: 98.95

GC content: 61.87

Gene sequence:

>375_bases
ATGACGGAAAGATTTGAGACCGGCATGGCCACCCGTCGCACGGTTTTGGGGGATGCCCATGTGGATCAGGCCACCGCCAA
GACGACGCCATTTGACGCGCCGTTCCAACAGATGATCACTGAAGGCGCCTGGGGGACGCTTTGGGCGGATGACGCGATCC
CGCACCGGGAGCGGTCTATGCTGACGCTCGCACTGCTGGCGGCCACCGGGAATTTTGAGGAGATCCCGATGCACATCCGC
GCCACGGCCAATACCGGTGCCAGTCAGGAGGATGTGATCCAGGCCTTCCTCCACGTGGCCGTCTATGCGGGCGTGCCCAA
GGCGAACCATGCGATCAAATTGGCCAAGCAGACATTCGCGGAGATGGAGGCATGA

Upstream 100 bases:

>100_bases
GATCTGGAATTCCTGCGCGGCTCCGCAAGTGCCCAGAAGGCCATGGCCGAAAACTACGTGGGCTTGCCCTATTGAACGCC
CCACTGAAAGGATGTCCGAT

Downstream 100 bases:

>100_bases
GCATTCATGCCCCCCGCGATCTGTCTCGCCATCCTGCCGCGCTGACACCACGCTACAGAAGCTCTGTCCTGCGATCGCCG
AAACAGCGGCTGATCGCGCT

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTERFETGMATRRTVLGDAHVDQATAKTTPFDAPFQQMITEGAWGTLWADDAIPHRERSMLTLALLAATGNFEEIPMHIR
ATANTGASQEDVIQAFLHVAVYAGVPKANHAIKLAKQTFAEMEA

Sequences:

>Translated_124_residues
MTERFETGMATRRTVLGDAHVDQATAKTTPFDAPFQQMITEGAWGTLWADDAIPHRERSMLTLALLAATGNFEEIPMHIR
ATANTGASQEDVIQAFLHVAVYAGVPKANHAIKLAKQTFAEMEA
>Mature_123_residues
TERFETGMATRRTVLGDAHVDQATAKTTPFDAPFQQMITEGAWGTLWADDAIPHRERSMLTLALLAATGNFEEIPMHIRA
TANTGASQEDVIQAFLHVAVYAGVPKANHAIKLAKQTFAEMEA

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13540; Mature: 13409

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERFETGMATRRTVLGDAHVDQATAKTTPFDAPFQQMITEGAWGTLWADDAIPHRERSM
CCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCHHHH
LTLALLAATGNFEEIPMHIRATANTGASQEDVIQAFLHVAVYAGVPKANHAIKLAKQTFA
HHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EMEA
HCCC
>Mature Secondary Structure 
TERFETGMATRRTVLGDAHVDQATAKTTPFDAPFQQMITEGAWGTLWADDAIPHRERSM
CCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCHHHH
LTLALLAATGNFEEIPMHIRATANTGASQEDVIQAFLHVAVYAGVPKANHAIKLAKQTFA
HHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EMEA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]