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The map label for this gene is ugpA [C]

Identifier: 89056597

GI number: 89056597

Start: 4213865

End: 4214728

Strand: Direct

Name: ugpA [C]

Synonym: Jann_4106

Alternate gene names: 89056597

Gene position: 4213865-4214728 (Clockwise)

Preceding gene: 89056586

Following gene: 89056598

Centisome position: 97.59

GC content: 61.81

Gene sequence:

>864_bases
ATGGCCCGTACCAACCGCCCCCACCCATGGATGATGCTCCTGCCCGCGCTGGCGATCTTGGTCGTCGTGGGCGTCGTGCC
CCTTCTCATCGTGTTCCATTACTCCTTTTACGACATCTTCACCCTGCAATCGCGGTCATGGGTGGGGACTCAATGGTATC
AGGATCTGCTGACATCGGACCGATTCTACGACAGCCTGGCACGCAGCCTTGGCTTTTCCGCGTTGGCGCTGTCCATCCAG
TTTCCCCTGGGCATCTGCATCGCCCTGATGATCCCGCGCAGTGGCCCGGTGCGGACGGGCACGCTGGTTTTGCTGGCGCT
GCCGCTGGTGGTGCCGTGGAACATGATCCCGATCATCTGGCTGAGCCTGATTGACGCCGATACCGGCCTGATCGGTCAGG
CGATCACGGCCGTAGGGTGGGAGTTCGACTATAAATTCAATGCCATCCATACGTGGGCTTTGATCGCGGTAATGGACACC
TGGCATTGGGTCGGGCTGGTCGCGATCCTGTCCTATTCCGGCCTCGCCAGCATATCCCCAAGCCATTATCAGGCGGCGGC
GATTGATCAGGCCTCGCGCTGGCAGGTGTTTCGCTGGGTTGAGTTGCCCGCCATGCGGGGCGTGCTTTTGATGGCGTTTC
TGCTGCGGTTCATGGACAGCTTCATGATCTACACCGAGGCCTTTGGCATCAACGCCGGGGGGCCAGCCGCGGCCACGTCC
TTCCTCACCCTGGATCTGGGGGAGGAGATGCGCGGGTTCGACTACGGTCCCGCCAGCGCACGGTCCATCGTCTATTTCGC
CATGACCGCCTGCGTCGTCTGGGTCTTCCTGCGCGGCTTCAGTCGTGAGGAGTCGGGCCGATGA

Upstream 100 bases:

>100_bases
CGGCGGGCAGGGATCTACTGTGCCGCCGGTCTTCCAATTTGCCTAATGTAGTGTGGATACCCATGCCGACGTCCACGCCC
CCCTGCGGTCAAAGCTAGCC

Downstream 100 bases:

>100_bases
AAGCGATCAAACTGCTCTGCCTGCTGCTTCTGGCCGTCTTCATCCTGCTCCCCTTCGTGCAGGTGGCACAGCTCAGCGTG
ATCTCCACCCTCGGGACGCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MARTNRPHPWMMLLPALAILVVVGVVPLLIVFHYSFYDIFTLQSRSWVGTQWYQDLLTSDRFYDSLARSLGFSALALSIQ
FPLGICIALMIPRSGPVRTGTLVLLALPLVVPWNMIPIIWLSLIDADTGLIGQAITAVGWEFDYKFNAIHTWALIAVMDT
WHWVGLVAILSYSGLASISPSHYQAAAIDQASRWQVFRWVELPAMRGVLLMAFLLRFMDSFMIYTEAFGINAGGPAAATS
FLTLDLGEEMRGFDYGPASARSIVYFAMTACVVWVFLRGFSREESGR

Sequences:

>Translated_287_residues
MARTNRPHPWMMLLPALAILVVVGVVPLLIVFHYSFYDIFTLQSRSWVGTQWYQDLLTSDRFYDSLARSLGFSALALSIQ
FPLGICIALMIPRSGPVRTGTLVLLALPLVVPWNMIPIIWLSLIDADTGLIGQAITAVGWEFDYKFNAIHTWALIAVMDT
WHWVGLVAILSYSGLASISPSHYQAAAIDQASRWQVFRWVELPAMRGVLLMAFLLRFMDSFMIYTEAFGINAGGPAAATS
FLTLDLGEEMRGFDYGPASARSIVYFAMTACVVWVFLRGFSREESGR
>Mature_286_residues
ARTNRPHPWMMLLPALAILVVVGVVPLLIVFHYSFYDIFTLQSRSWVGTQWYQDLLTSDRFYDSLARSLGFSALALSIQF
PLGICIALMIPRSGPVRTGTLVLLALPLVVPWNMIPIIWLSLIDADTGLIGQAITAVGWEFDYKFNAIHTWALIAVMDTW
HWVGLVAILSYSGLASISPSHYQAAAIDQASRWQVFRWVELPAMRGVLLMAFLLRFMDSFMIYTEAFGINAGGPAAATSF
LTLDLGEEMRGFDYGPASARSIVYFAMTACVVWVFLRGFSREESGR

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32060; Mature: 31929

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTNRPHPWMMLLPALAILVVVGVVPLLIVFHYSFYDIFTLQSRSWVGTQWYQDLLTSD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH
RFYDSLARSLGFSALALSIQFPLGICIALMIPRSGPVRTGTLVLLALPLVVPWNMIPIIW
HHHHHHHHHHCHHHHEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
LSLIDADTGLIGQAITAVGWEFDYKFNAIHTWALIAVMDTWHWVGLVAILSYSGLASISP
HHHHHCCCCHHHHHHHHHCCEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SHYQAAAIDQASRWQVFRWVELPAMRGVLLMAFLLRFMDSFMIYTEAFGINAGGPAAATS
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
FLTLDLGEEMRGFDYGPASARSIVYFAMTACVVWVFLRGFSREESGR
EEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ARTNRPHPWMMLLPALAILVVVGVVPLLIVFHYSFYDIFTLQSRSWVGTQWYQDLLTSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH
RFYDSLARSLGFSALALSIQFPLGICIALMIPRSGPVRTGTLVLLALPLVVPWNMIPIIW
HHHHHHHHHHCHHHHEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
LSLIDADTGLIGQAITAVGWEFDYKFNAIHTWALIAVMDTWHWVGLVAILSYSGLASISP
HHHHHCCCCHHHHHHHHHCCEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SHYQAAAIDQASRWQVFRWVELPAMRGVLLMAFLLRFMDSFMIYTEAFGINAGGPAAATS
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
FLTLDLGEEMRGFDYGPASARSIVYFAMTACVVWVFLRGFSREESGR
EEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]