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The map label for this gene is ycjP [C]

Identifier: 89056598

GI number: 89056598

Start: 4214725

End: 4215510

Strand: Direct

Name: ycjP [C]

Synonym: Jann_4107

Alternate gene names: 89056598

Gene position: 4214725-4215510 (Clockwise)

Preceding gene: 89056597

Following gene: 89056612

Centisome position: 97.61

GC content: 59.8

Gene sequence:

>786_bases
ATGAAAGCGATCAAACTGCTCTGCCTGCTGCTTCTGGCCGTCTTCATCCTGCTCCCCTTCGTGCAGGTGGCACAGCTCAG
CGTGATCTCCACCCTCGGGACGCCCGACGCGCCCCTGGGCACCGTCACCACCCTGAATTACCGCAACATCTTTGCATCCA
GCGCGCTGACGTCGTCGCTGGTGAATTCCGTGACCTATGTGACCCTCAACGTGGCCCTCACCCTGCTGGTCGCCCTGCCC
GCCGCCTATGCCATCTCACGCCACCAGTTTCGCGGCAAGCGGGCGTTCTTCATCACGTTGCTGGCGTTTCGCGTGACCCC
GCCTGTCGTACTTTCGCTGCCAGTCTTCATCTGGTTTTCGCAGCTGAACCTGATCAACACGCCCATTGGAATCGCCCTGG
TCCATTGCGTCTTCAACGTGCCCATCGCGATCTGGATATTGGAAAGCTTCATTTCTGCCGTTCCCCGCGCCTATGACGAG
TCCGCCAGGCTGGACGGCTATTCCACGACACGATTCTTCTACACCTTCCTCATCCCCGTCATCGCGCCGGGCATCGGGGT
CACGATGTTCTTCTGCTTCGTGTTCTCATGGGTGGAGGTCGTGTTCGCGCGCACCCTGACCGTGACAGACGGCAAGCCGA
TCACCATGGCGATCAGCAATCTGTTCGGCTTCAACACGGATGTCGGGCTGGTTATGGCGATGACCGTTTTTTCGCTGCTG
CCGGGGTTGGTGATGATCTATTTCGTCCGGCACCACATCGCGCGCGGGTTTGTGGTACGGGCCTAG

Upstream 100 bases:

>100_bases
ACTACGGTCCCGCCAGCGCACGGTCCATCGTCTATTTCGCCATGACCGCCTGCGTCGTCTGGGTCTTCCTGCGCGGCTTC
AGTCGTGAGGAGTCGGGCCG

Downstream 100 bases:

>100_bases
CCCAAGGTCGTGCTCGCGCGATGCGTCCCGCCCTTCTCCGACGACGCGGTCACCGTCACGCTCGCGCCCGACCCGGTGCC
CCTTACCAGCCATTCCACCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKAIKLLCLLLLAVFILLPFVQVAQLSVISTLGTPDAPLGTVTTLNYRNIFASSALTSSLVNSVTYVTLNVALTLLVALP
AAYAISRHQFRGKRAFFITLLAFRVTPPVVLSLPVFIWFSQLNLINTPIGIALVHCVFNVPIAIWILESFISAVPRAYDE
SARLDGYSTTRFFYTFLIPVIAPGIGVTMFFCFVFSWVEVVFARTLTVTDGKPITMAISNLFGFNTDVGLVMAMTVFSLL
PGLVMIYFVRHHIARGFVVRA

Sequences:

>Translated_261_residues
MKAIKLLCLLLLAVFILLPFVQVAQLSVISTLGTPDAPLGTVTTLNYRNIFASSALTSSLVNSVTYVTLNVALTLLVALP
AAYAISRHQFRGKRAFFITLLAFRVTPPVVLSLPVFIWFSQLNLINTPIGIALVHCVFNVPIAIWILESFISAVPRAYDE
SARLDGYSTTRFFYTFLIPVIAPGIGVTMFFCFVFSWVEVVFARTLTVTDGKPITMAISNLFGFNTDVGLVMAMTVFSLL
PGLVMIYFVRHHIARGFVVRA
>Mature_261_residues
MKAIKLLCLLLLAVFILLPFVQVAQLSVISTLGTPDAPLGTVTTLNYRNIFASSALTSSLVNSVTYVTLNVALTLLVALP
AAYAISRHQFRGKRAFFITLLAFRVTPPVVLSLPVFIWFSQLNLINTPIGIALVHCVFNVPIAIWILESFISAVPRAYDE
SARLDGYSTTRFFYTFLIPVIAPGIGVTMFFCFVFSWVEVVFARTLTVTDGKPITMAISNLFGFNTDVGLVMAMTVFSLL
PGLVMIYFVRHHIARGFVVRA

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=178, Percent_Identity=21.9101123595506, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28750; Mature: 28750

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure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HHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]