Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056437

Identifier: 89056437

GI number: 89056437

Start: 4045728

End: 4046027

Strand: Direct

Name: 89056437

Synonym: Jann_3946

Alternate gene names: NA

Gene position: 4045728-4046027 (Clockwise)

Preceding gene: 89056427

Following gene: 89056441

Centisome position: 93.69

GC content: 59.67

Gene sequence:

>300_bases
TTGCAAACCGGTTCACACTTTGGTCACGGGTCAGGTCCCGATTGCGCCATCAGATGCGGGCACAACGGCGTCATCCAGAC
CGATGACGCAAGATTTTCAGGAGACACGATCATGATCGTTACCGACACGCCCCCTGCCGCACCACAGCGCGCCTGTGCTC
GGGCGGGTCGGATCTTCGTGGTCGACACAACCAAACGCATCCCACGGCCCCAGAGCCCTGTACCATCGGATGCCTACAGC
CACGACAGCTTTGTGTTTCACTCAGACATCAGCCCGAAAGCGTGCGCACATCACCCCTGA

Upstream 100 bases:

>100_bases
GAGAGGTAGCAGCGCAGGGGGGCGAAGGCGAGTGGGGGCCGCAAGCGCCGGGACGCGCCCGGCACAATTTTAGGTAAATC
GTCCGGGAAAGACACAGTCT

Downstream 100 bases:

>100_bases
AAAAACGTCGGCCCGGTCAGGAGCCGACGTTGGTTTTGTGATCCGCGACCGCCCTTCGAGTTACTTGAGCGGGTGTCTTT
CCTGCGCTATCGCCCTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MQTGSHFGHGSGPDCAIRCGHNGVIQTDDARFSGDTIMIVTDTPPAAPQRACARAGRIFVVDTTKRIPRPQSPVPSDAYS
HDSFVFHSDISPKACAHHP

Sequences:

>Translated_99_residues
MQTGSHFGHGSGPDCAIRCGHNGVIQTDDARFSGDTIMIVTDTPPAAPQRACARAGRIFVVDTTKRIPRPQSPVPSDAYS
HDSFVFHSDISPKACAHHP
>Mature_99_residues
MQTGSHFGHGSGPDCAIRCGHNGVIQTDDARFSGDTIMIVTDTPPAAPQRACARAGRIFVVDTTKRIPRPQSPVPSDAYS
HDSFVFHSDISPKACAHHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10581; Mature: 10581

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGSHFGHGSGPDCAIRCGHNGVIQTDDARFSGDTIMIVTDTPPAAPQRACARAGRIFV
CCCCCCCCCCCCCCEEEEECCCCEEECCCCEECCCEEEEEECCCCCCHHHHHHHCCCEEE
VDTTKRIPRPQSPVPSDAYSHDSFVFHSDISPKACAHHP
EECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MQTGSHFGHGSGPDCAIRCGHNGVIQTDDARFSGDTIMIVTDTPPAAPQRACARAGRIFV
CCCCCCCCCCCCCCEEEEECCCCEEECCCCEECCCEEEEEECCCCCCHHHHHHHCCCEEE
VDTTKRIPRPQSPVPSDAYSHDSFVFHSDISPKACAHHP
EECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA