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The map label for this gene is aglR [H]

Identifier: 89056427

GI number: 89056427

Start: 4034065

End: 4035138

Strand: Direct

Name: aglR [H]

Synonym: Jann_3936

Alternate gene names: 89056427

Gene position: 4034065-4035138 (Clockwise)

Preceding gene: 89056406

Following gene: 89056437

Centisome position: 93.42

GC content: 64.62

Gene sequence:

>1074_bases
ATGAGCAGCGACCTTGGCCATCCGACCAGCGGTGAAAAACCGACGCTGCGCTCTTTGGCTGTGGCGACAGGCTTCTCTGT
CGCAACGATCAGCCGGGCCTTGGCCGACGATCCGCGAATCGCCGCAAAGACCCGGGCGACCGTGGCTGAGGCGGCGGCGG
CGGCCGGATACGTGCCGGACCGTGCCGCGCGTCGGCTGCGCACCGGGCGCACGCAGGTCGTGACCCTTCTGCTCAACACC
GAGCACGAGTTTCTGGGCTTCACCCACGAGTTTCTGTCCGGCATGACTGAGGCCCTGCGCGGCACCGGATATTCCGTCAA
CGTCGTGCCGGATCACGTGGGTGAAGACCGGCTGGAACCAGTGCGCAACATCCTGCGCAATCACCTGGCCGACGGTGTTC
TGTTCACCCGGACCGAGGCGTTTGACCCCCGCGTCCGCCTGTTGCTGGAGGCGGATTTTCCCTTCGTCAGCCATGGCCGG
ACGGAGTTCACGACGCCGCACCCTTATGTCGATTTCGACAACGAGGCCTTCGCCCGCACCGCCGTGCAACGCCTTGTCGC
GAAGGGTCGCAAGCGTCTGTCCCTGATCCTGCCGGAGGATCGGTTCACCTTCACGCAACACCTGCGCTATGGCTTTCTCA
GCGCCGTGCGGGAGGCCGGGGTTGAGTATGAAATTGTCAGCGGCGTAACGCTGGACAGCTCGTCCGCCGATATCGCGCAA
GCCACGCGCGACAGCCGAAACTCCCCCACTCCGCCTGATGGCTATGTTTGCGTGGGCGAGGTGACCGCGCTCGTCACCCT
CTCCGCCCTGTCCGACAGCGGCGCGGTTCTGGGCCGTGACGCGGATATCTTTGCCAAACGCGCCTCGCCCATCTTCGACA
ACATCCGCCCGCGTATCGACACCGTTTACGAGGACCTGCGCGAGACGGGTCACAAGATGGCCGAGATGCTGCTGAGGCGT
ATGGGGGGCGAGGCCCCGACTGGCCTCACGCATCTTCTGGCGCCGGATTTTGAGCAATTGGCTCATTCAGAGAGATCCGC
TGATTGCACGCCCTCCGGCGTGACCCACATCTGA

Upstream 100 bases:

>100_bases
TCTGCATTGCAGAATGTAGTCGTTCAGAAATCGCGCTATTGAAACGTTTAAAATCATGCGCAATATACTGCTGAATGCAA
CTTGAAGGCGACCCCTCTTT

Downstream 100 bases:

>100_bases
CGGCTGTCGCCGATGCGCATCTGGACGGTTTTGACCTCCAGGAATTCCTCAAGACCATAGCGCCCCAATTCGCGTCCCTG
CCCGCTTTCCTTGACCCCGC

Product: LacI family transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSSDLGHPTSGEKPTLRSLAVATGFSVATISRALADDPRIAAKTRATVAEAAAAAGYVPDRAARRLRTGRTQVVTLLLNT
EHEFLGFTHEFLSGMTEALRGTGYSVNVVPDHVGEDRLEPVRNILRNHLADGVLFTRTEAFDPRVRLLLEADFPFVSHGR
TEFTTPHPYVDFDNEAFARTAVQRLVAKGRKRLSLILPEDRFTFTQHLRYGFLSAVREAGVEYEIVSGVTLDSSSADIAQ
ATRDSRNSPTPPDGYVCVGEVTALVTLSALSDSGAVLGRDADIFAKRASPIFDNIRPRIDTVYEDLRETGHKMAEMLLRR
MGGEAPTGLTHLLAPDFEQLAHSERSADCTPSGVTHI

Sequences:

>Translated_357_residues
MSSDLGHPTSGEKPTLRSLAVATGFSVATISRALADDPRIAAKTRATVAEAAAAAGYVPDRAARRLRTGRTQVVTLLLNT
EHEFLGFTHEFLSGMTEALRGTGYSVNVVPDHVGEDRLEPVRNILRNHLADGVLFTRTEAFDPRVRLLLEADFPFVSHGR
TEFTTPHPYVDFDNEAFARTAVQRLVAKGRKRLSLILPEDRFTFTQHLRYGFLSAVREAGVEYEIVSGVTLDSSSADIAQ
ATRDSRNSPTPPDGYVCVGEVTALVTLSALSDSGAVLGRDADIFAKRASPIFDNIRPRIDTVYEDLRETGHKMAEMLLRR
MGGEAPTGLTHLLAPDFEQLAHSERSADCTPSGVTHI
>Mature_356_residues
SSDLGHPTSGEKPTLRSLAVATGFSVATISRALADDPRIAAKTRATVAEAAAAAGYVPDRAARRLRTGRTQVVTLLLNTE
HEFLGFTHEFLSGMTEALRGTGYSVNVVPDHVGEDRLEPVRNILRNHLADGVLFTRTEAFDPRVRLLLEADFPFVSHGRT
EFTTPHPYVDFDNEAFARTAVQRLVAKGRKRLSLILPEDRFTFTQHLRYGFLSAVREAGVEYEIVSGVTLDSSSADIAQA
TRDSRNSPTPPDGYVCVGEVTALVTLSALSDSGAVLGRDADIFAKRASPIFDNIRPRIDTVYEDLRETGHKMAEMLLRRM
GGEAPTGLTHLLAPDFEQLAHSERSADCTPSGVTHI

Specific function: Probable regulatory protein for the binding-protein- dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=328, Percent_Identity=24.6951219512195, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787906, Length=270, Percent_Identity=27.037037037037, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38955; Mature: 38824

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDLGHPTSGEKPTLRSLAVATGFSVATISRALADDPRIAAKTRATVAEAAAAAGYVPD
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCH
RAARRLRTGRTQVVTLLLNTEHEFLGFTHEFLSGMTEALRGTGYSVNVVPDHVGEDRLEP
HHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
VRNILRNHLADGVLFTRTEAFDPRVRLLLEADFPFVSHGRTEFTTPHPYVDFDNEAFART
HHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCHHHHHH
AVQRLVAKGRKRLSLILPEDRFTFTQHLRYGFLSAVREAGVEYEIVSGVTLDSSSADIAQ
HHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCHHHHH
ATRDSRNSPTPPDGYVCVGEVTALVTLSALSDSGAVLGRDADIFAKRASPIFDNIRPRID
HHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCHHHHHCHHHH
TVYEDLRETGHKMAEMLLRRMGGEAPTGLTHLLAPDFEQLAHSERSADCTPSGVTHI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSDLGHPTSGEKPTLRSLAVATGFSVATISRALADDPRIAAKTRATVAEAAAAAGYVPD
CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCH
RAARRLRTGRTQVVTLLLNTEHEFLGFTHEFLSGMTEALRGTGYSVNVVPDHVGEDRLEP
HHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
VRNILRNHLADGVLFTRTEAFDPRVRLLLEADFPFVSHGRTEFTTPHPYVDFDNEAFART
HHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCHHHHHH
AVQRLVAKGRKRLSLILPEDRFTFTQHLRYGFLSAVREAGVEYEIVSGVTLDSSSADIAQ
HHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCHHHHH
ATRDSRNSPTPPDGYVCVGEVTALVTLSALSDSGAVLGRDADIFAKRASPIFDNIRPRID
HHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCHHHHHCHHHH
TVYEDLRETGHKMAEMLLRRMGGEAPTGLTHLLAPDFEQLAHSERSADCTPSGVTHI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]