| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056302
Identifier: 89056302
GI number: 89056302
Start: 3897542
End: 3899623
Strand: Direct
Name: 89056302
Synonym: Jann_3811
Alternate gene names: NA
Gene position: 3897542-3899623 (Clockwise)
Preceding gene: 89056301
Following gene: 89056303
Centisome position: 90.26
GC content: 62.78
Gene sequence:
>2082_bases ATGTCCTCTGCCCCCTACCGCCTTGGTGTCGATATCGGCGGGACCTTCACGGATGTCGTTCTGGAAGGCGCAGGCCAGCA GCACTCCACCAAGGTGCTGACGACCTATGCGGCCCCAGAGGATGCGATTATCGACGGGATGCAGCAGGTCTGCGCCAAGG CAGGCATCACCCCCGGTCAGATCACGCAGATCATCCATGGCACGACGCTGGCCACCAATGCCCTGATTGAGCGACGCGGG GCCAGGACGGCCCTGATCACGACGGAGGGCTTCCGCGATGTGATCGAGATGCGGACGGAAAGCCGGTTCGAGCAATATGA CCTGAATTTGCAACTGCCCGAGCCGCTGTTGCCGCGTCAGATGCGATTTACCGTGGCGGAACGGGTGAACGCCAAGGGCG AGGTGATGGTTAACCTTGATGAAGCTAGCGTTCGGGAGGTGGCAGGCCGGATCAGGGAAGCGGGGTTTGAGAGCGTCGCC GTTGGGCTGATCCATTCCTACCTCAACCCCGCCCATGAAAAGATGGTGCGCGACGTTCTGGCAGAGGTTGTACCAGGCGT GTCGGTTTCCCTGTCCTCCGAGGTCTCGCCGCAGATGCGGGAGTATGAGCGGTTCAACACCGTCGTGGCCAACGCCTATA TCAAGCCGCTGATGTCATCGTATCTGGGACGGCTGAAGAAGAGGTTGGGCGATGAGGGCGTGACCTGCCGCATCTTTCTG ATGCATTCGGGTGGGGGGATTATCTCGATCCAGAACGCAGCGGAATTTCCTGTACGGCTGGTGGAATCCGGGCCCGCCGG TGGCGCGGTGTTCGCGGCCCACATCGCAGCGCGCTACGGGTTGGACAAAGTGTTGTCCTTCGACATGGGCGGTACCACGG CGAAGATCTGCCTGATCAAGAACCAGACGCCGAAGACCAGCCGCGTGTTTGAAGTGGCGCGGACATATCGGTTCAAGAAA GGATCGGGCATGCCTATATCAATTCCTGTAATTGATATGGTCGAGATTGGCGCGGGCGGCGGATCACTGGCCCATGTGGA TGCGATGCGCCAGATCCGCGTGGGGCCGGAAAGCGCCGGGTCCGAACCCGGGCCAGCCTGCTACGGGCGCGGTGGGAACC GGCCTGCGGTCACCGATGCGGACCTGATCCTTGGTAAGCTGGACCCGGACAATTTCGCCGGAGGCTCCATCGTCCTTGAT CCCTCAGCCGCCTCCTCCGCCCTTGAGGGCGTCCTCGGCGCTGCGCTGGGGATGGACGCCGTGGAAGCCGCCTTCGGCGT CGCGGAGGTCGTGGACGAAAACATGGCCAACGCCGCGCGGGTTCACGCGGTGGAGAACGGCGAGGACCTGAGCGACTACA CCATGATCGCCTTCGGCGGCGCGGCCCCGCTGCATGGGGGTCGGCTGTGCGAGAAATTGGGCATTGCCCGCTGCCTTGTT CCACCCGGCGCAGGGGTGGGCAGTGCCATCGGGTTCCTGCGTGCGCCGTTTTCGTTCGAGGCCAACCGGTCGGTCTATAT GACGCTGTCGGACTTTGATCCGCAGGTAATCAAGACGCTTCTGTCGGAACTTCAGACCGAGGCGATCGGCTTCGTGCGCA CCTGCGATGCGAACGCGCCGATCCACTCTGAATTCAAGGTCTACATGCGCTATACCGGGCAAGGGTGGGAGATCCCCATC GACCTGTCCGAAGCTCAGGCCATGACCCCTGACGCCGCCACCTTCCAGACGCGGTTTGAAGAGGATTACGCCAAGCTCTT CGGGCGCACGGTGGCGGGCATGGATATTGAGATCACGGTCTGGTCCGTCAACGCGACAACCCCACCCGAACCGGTTGCGC GGATGACGGAAGCGCAGAGCACGGACGCCGCTGCCGCCACGCTTGGCACGCGCAATCTGTTCGACCCTGCCCAGGGCGCA TTCCTTGAGGCTGCCGTGATCGACCGGACGGCCATGGGCATTGGTCAGATCGCCCAGGGCCCCGCCACAATCACCGAGGA TGAAACGACGATCATCCTGCCCGCCAGCCGCCGCGCCTCTTGTCAGCCTGACGGCTGCATCGACCTTGTGAAGAAGGATT GA
Upstream 100 bases:
>100_bases AGGATAAAATTTCCTTATCGGTGGTGGTATTTCTATTGATTTGACGTCTCCAAGCCGCTGCCGTTCTATGGTGTCCTGCA CGCACCTACGGAGCCCTACC
Downstream 100 bases:
>100_bases GCCGATGAGTGCTTCAAACGACGCCGGGCCCGGCAATGTCGCCTACCAAGTCATGTGGAACCGCCTGATCTCCATCGTGG AGGAACAGGCGCAAGCGTTG
Product: 5-oxoprolinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 692
Protein sequence:
>693_residues MSSAPYRLGVDIGGTFTDVVLEGAGQQHSTKVLTTYAAPEDAIIDGMQQVCAKAGITPGQITQIIHGTTLATNALIERRG ARTALITTEGFRDVIEMRTESRFEQYDLNLQLPEPLLPRQMRFTVAERVNAKGEVMVNLDEASVREVAGRIREAGFESVA VGLIHSYLNPAHEKMVRDVLAEVVPGVSVSLSSEVSPQMREYERFNTVVANAYIKPLMSSYLGRLKKRLGDEGVTCRIFL MHSGGGIISIQNAAEFPVRLVESGPAGGAVFAAHIAARYGLDKVLSFDMGGTTAKICLIKNQTPKTSRVFEVARTYRFKK GSGMPISIPVIDMVEIGAGGGSLAHVDAMRQIRVGPESAGSEPGPACYGRGGNRPAVTDADLILGKLDPDNFAGGSIVLD PSAASSALEGVLGAALGMDAVEAAFGVAEVVDENMANAARVHAVENGEDLSDYTMIAFGGAAPLHGGRLCEKLGIARCLV PPGAGVGSAIGFLRAPFSFEANRSVYMTLSDFDPQVIKTLLSELQTEAIGFVRTCDANAPIHSEFKVYMRYTGQGWEIPI DLSEAQAMTPDAATFQTRFEEDYAKLFGRTVAGMDIEITVWSVNATTPPEPVARMTEAQSTDAAAATLGTRNLFDPAQGA FLEAAVIDRTAMGIGQIAQGPATITEDETTIILPASRRASCQPDGCIDLVKKD
Sequences:
>Translated_693_residues MSSAPYRLGVDIGGTFTDVVLEGAGQQHSTKVLTTYAAPEDAIIDGMQQVCAKAGITPGQITQIIHGTTLATNALIERRG ARTALITTEGFRDVIEMRTESRFEQYDLNLQLPEPLLPRQMRFTVAERVNAKGEVMVNLDEASVREVAGRIREAGFESVA VGLIHSYLNPAHEKMVRDVLAEVVPGVSVSLSSEVSPQMREYERFNTVVANAYIKPLMSSYLGRLKKRLGDEGVTCRIFL MHSGGGIISIQNAAEFPVRLVESGPAGGAVFAAHIAARYGLDKVLSFDMGGTTAKICLIKNQTPKTSRVFEVARTYRFKK GSGMPISIPVIDMVEIGAGGGSLAHVDAMRQIRVGPESAGSEPGPACYGRGGNRPAVTDADLILGKLDPDNFAGGSIVLD PSAASSALEGVLGAALGMDAVEAAFGVAEVVDENMANAARVHAVENGEDLSDYTMIAFGGAAPLHGGRLCEKLGIARCLV PPGAGVGSAIGFLRAPFSFEANRSVYMTLSDFDPQVIKTLLSELQTEAIGFVRTCDANAPIHSEFKVYMRYTGQGWEIPI DLSEAQAMTPDAATFQTRFEEDYAKLFGRTVAGMDIEITVWSVNATTPPEPVARMTEAQSTDAAAATLGTRNLFDPAQGA FLEAAVIDRTAMGIGQIAQGPATITEDETTIILPASRRASCQPDGCIDLVKKD >Mature_692_residues SSAPYRLGVDIGGTFTDVVLEGAGQQHSTKVLTTYAAPEDAIIDGMQQVCAKAGITPGQITQIIHGTTLATNALIERRGA RTALITTEGFRDVIEMRTESRFEQYDLNLQLPEPLLPRQMRFTVAERVNAKGEVMVNLDEASVREVAGRIREAGFESVAV GLIHSYLNPAHEKMVRDVLAEVVPGVSVSLSSEVSPQMREYERFNTVVANAYIKPLMSSYLGRLKKRLGDEGVTCRIFLM HSGGGIISIQNAAEFPVRLVESGPAGGAVFAAHIAARYGLDKVLSFDMGGTTAKICLIKNQTPKTSRVFEVARTYRFKKG SGMPISIPVIDMVEIGAGGGSLAHVDAMRQIRVGPESAGSEPGPACYGRGGNRPAVTDADLILGKLDPDNFAGGSIVLDP SAASSALEGVLGAALGMDAVEAAFGVAEVVDENMANAARVHAVENGEDLSDYTMIAFGGAAPLHGGRLCEKLGIARCLVP PGAGVGSAIGFLRAPFSFEANRSVYMTLSDFDPQVIKTLLSELQTEAIGFVRTCDANAPIHSEFKVYMRYTGQGWEIPID LSEAQAMTPDAATFQTRFEEDYAKLFGRTVAGMDIEITVWSVNATTPPEPVARMTEAQSTDAAAATLGTRNLFDPAQGAF LEAAVIDRTAMGIGQIAQGPATITEDETTIILPASRRASCQPDGCIDLVKKD
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=762, Percent_Identity=28.6089238845144, Blast_Score=202, Evalue=1e-51, Organism=Caenorhabditis elegans, GI133901900, Length=396, Percent_Identity=33.5858585858586, Blast_Score=164, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6322634, Length=749, Percent_Identity=27.9038718291055, Blast_Score=203, Evalue=8e-53, Organism=Drosophila melanogaster, GI45550492, Length=739, Percent_Identity=29.3640054127199, Blast_Score=212, Evalue=6e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 73727; Mature: 73596
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAPYRLGVDIGGTFTDVVLEGAGQQHSTKVLTTYAAPEDAIIDGMQQVCAKAGITPGQ CCCCCEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHH ITQIIHGTTLATNALIERRGARTALITTEGFRDVIEMRTESRFEQYDLNLQLPEPLLPRQ HHHHHCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHH MRFTVAERVNAKGEVMVNLDEASVREVAGRIREAGFESVAVGLIHSYLNPAHEKMVRDVL HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHH AEVVPGVSVSLSSEVSPQMREYERFNTVVANAYIKPLMSSYLGRLKKRLGDEGVTCRIFL HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE MHSGGGIISIQNAAEFPVRLVESGPAGGAVFAAHIAARYGLDKVLSFDMGGTTAKICLIK EECCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCHHHHHEECCCCCEEEEEEEE NQTPKTSRVFEVARTYRFKKGSGMPISIPVIDMVEIGAGGGSLAHVDAMRQIRVGPESAG CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC SEPGPACYGRGGNRPAVTDADLILGKLDPDNFAGGSIVLDPSAASSALEGVLGAALGMDA CCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCHHH VEAAFGVAEVVDENMANAARVHAVENGEDLSDYTMIAFGGAAPLHGGRLCEKLGIARCLV HHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEC PPGAGVGSAIGFLRAPFSFEANRSVYMTLSDFDPQVIKTLLSELQTEAIGFVRTCDANAP CCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCEEEECCCCCC IHSEFKVYMRYTGQGWEIPIDLSEAQAMTPDAATFQTRFEEDYAKLFGRTVAGMDIEITV CCCCEEEEEEECCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE WSVNATTPPEPVARMTEAQSTDAAAATLGTRNLFDPAQGAFLEAAVIDRTAMGIGQIAQG EEECCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHCCC PATITEDETTIILPASRRASCQPDGCIDLVKKD CCEEECCCEEEEEECCCCCCCCCCCCHHHCCCC >Mature Secondary Structure SSAPYRLGVDIGGTFTDVVLEGAGQQHSTKVLTTYAAPEDAIIDGMQQVCAKAGITPGQ CCCCEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHH ITQIIHGTTLATNALIERRGARTALITTEGFRDVIEMRTESRFEQYDLNLQLPEPLLPRQ HHHHHCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHH MRFTVAERVNAKGEVMVNLDEASVREVAGRIREAGFESVAVGLIHSYLNPAHEKMVRDVL HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHH AEVVPGVSVSLSSEVSPQMREYERFNTVVANAYIKPLMSSYLGRLKKRLGDEGVTCRIFL HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE MHSGGGIISIQNAAEFPVRLVESGPAGGAVFAAHIAARYGLDKVLSFDMGGTTAKICLIK EECCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCHHHHHEECCCCCEEEEEEEE NQTPKTSRVFEVARTYRFKKGSGMPISIPVIDMVEIGAGGGSLAHVDAMRQIRVGPESAG CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC SEPGPACYGRGGNRPAVTDADLILGKLDPDNFAGGSIVLDPSAASSALEGVLGAALGMDA CCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCHHH VEAAFGVAEVVDENMANAARVHAVENGEDLSDYTMIAFGGAAPLHGGRLCEKLGIARCLV HHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEC PPGAGVGSAIGFLRAPFSFEANRSVYMTLSDFDPQVIKTLLSELQTEAIGFVRTCDANAP CCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCEEEECCCCCC IHSEFKVYMRYTGQGWEIPIDLSEAQAMTPDAATFQTRFEEDYAKLFGRTVAGMDIEITV CCCCEEEEEEECCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE WSVNATTPPEPVARMTEAQSTDAAAATLGTRNLFDPAQGAFLEAAVIDRTAMGIGQIAQG EEECCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHCCC PATITEDETTIILPASRRASCQPDGCIDLVKKD CCEEECCCEEEEEECCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]