| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056214
Identifier: 89056214
GI number: 89056214
Start: 3808421
End: 3809056
Strand: Direct
Name: 89056214
Synonym: Jann_3723
Alternate gene names: NA
Gene position: 3808421-3809056 (Clockwise)
Preceding gene: 89056213
Following gene: 89056215
Centisome position: 88.2
GC content: 61.01
Gene sequence:
>636_bases ATGACCCTGAATATTATCGGATCCGGCTTTGGCCGGACAGGCACGATGTCGACAAAGATGGCCCTCAACCAGCTTGGCCT GGGGACCTGCCACCACATGAGCGAGGTCATGGGCGACCCGGAACAGCCGCCGTTCTGGTCAGCATATGTCGCCGGCGAGA GCGTCGACTGGCAGGCTGTCTTTGCCAAATACACCGCGCAGGTGGACTTTCCCGGTGCCGCCGTCTGGCCCGAGTTGGTC CGCGCCTTTCCCAGCGCCAAGGTGATCCACACCGAACGACCGGAAGAGGATTGGTGGGCCAGCTACTCCAAAACGATTGG CAAATTCTGGCTGCATTACAAAGCGCAACCCATGCCGCCCGAAATGATCGAATTTTTCGGCGCAATGGACACGTTGATCC GAAAAGGGGTGTTCGGCGGGTCAGACCGCGAGACCTGCATCGCCGCGTACCGGCGCAACAATGCCTTGGTTCGCGAAACC GTCCCGTCCAACAGGCTTTTGGTCTTCACGCCGTCAGATGGGTGGGAGCCGCTGTGTCGGTTCTTGGACGTGCCCGTGCC CGATGGTGATTTCCCGCGCAGCAACAGTCGCGATGAATTCTGGGCCCAGCTCGGCGGCGAACCTGCGGAGGCCTGA
Upstream 100 bases:
>100_bases ACCTGCGGACGTCTGAAGCGGGGCCAGCCCCGCGCTGGCCAGACGCTCCAGAAGATCCGCCCCAAAAAAACCTGTAACAC CAGATGGAAGTGAATTGCCC
Downstream 100 bases:
>100_bases ACACCCCGCCGTTGCGGTGGGACCCGCACACACCAATCCACAGAAAGAAACAACCTATTGACCCAGACACGTAACAAAGG AACCTCTGAGACCAACGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAVFAKYTAQVDFPGAAVWPELV RAFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPPEMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRET VPSNRLLVFTPSDGWEPLCRFLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA
Sequences:
>Translated_211_residues MTLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAVFAKYTAQVDFPGAAVWPELV RAFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPPEMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRET VPSNRLLVFTPSDGWEPLCRFLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA >Mature_210_residues TLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAVFAKYTAQVDFPGAAVWPELVR AFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPPEMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRETV PSNRLLVFTPSDGWEPLCRFLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23597; Mature: 23466
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAV CEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH FAKYTAQVDFPGAAVWPELVRAFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPP HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCH EMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRETVPSNRLLVFTPSDGWEPLCR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHH FLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA HHCCCCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAV EEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH FAKYTAQVDFPGAAVWPELVRAFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPP HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCH EMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRETVPSNRLLVFTPSDGWEPLCR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHH FLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA HHCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA