| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056020
Identifier: 89056020
GI number: 89056020
Start: 3587299
End: 3588384
Strand: Direct
Name: 89056020
Synonym: Jann_3529
Alternate gene names: NA
Gene position: 3587299-3588384 (Clockwise)
Preceding gene: 89056016
Following gene: 89056021
Centisome position: 83.08
GC content: 57.37
Gene sequence:
>1086_bases ATGTCTTCGGGATTTTTTTCAGGTGGCGCGCATGGGGGTGCTCACGGTGGCGCGCATGGGGGTGCCCACGGTGGCGCCCA CGGCGGCGCACATGGGGGTGCCCACGGCGGCGCACATGGCATCATGCACGCCGGTGGCCCGCCGTCGTCACTGCTTAGCC ATGGGCTGACAGTCAGTCATGACGGCACCATGGGGTATTGGGAGGGCGACGCTGATATTGCGGATCCTAGTTTAGGCCAA AATCCAGGCTCGCTTCAGTATCTCTCGCCTGATCAACGGCATCAGGTGCTCTTGGCCGAACTTCTTGGAGTGTTCAAGGC AAGAAGCCGGACGGGTTCGGCCTCCGTCAGGGTCCGCAATGCTGACATTGCGACGTTGGTGCCGCCTCCTACAAACGATT ACTTCGTAGGACAGCTAAAATTGCTTCGGGGCTATGCCGACCTTCGCAGTGATCGACATGCCGAGATCCTGGCGCAGACC GAGGACATAATGTCCTTCTTTGGTGCAATCGTGCATCTCAATTCGTCCCGGAGGGAACATACGATCGAGGTTCTCAACCT TGTACAAGCGCTTTGCGTCATGCTGGAAATGCAAATTAAACACATGGTGCGTTGCCCGCGCCCCATAGATTTTTCGTCGC GGGTGCAGCCGATGATCCAAACACCGGCGCATTCATCCTTCCCCTCCGGCCATGCGGTTGAGGCCTATGCCGTTGCGACG GTCCTGTCTGATTTAGTCATGTCCGGAAGCGCACCCGACATCGAAAAAGAAGACGTGACTACAAGACTGCGTCAACTTGC TCACCGGATCGCCGCCAATCGTGTTGTCGCAGGCTTGCATTTTCCGGCTGATAGCGCGGCTGGTGCGTTTCTCGGATCAC AGATTGGCGCGGCCATCGTCGCCCTGACGAAGCCGCGGCAATCCTTATCACAAATCACCTATGGCAATAGCGTGAAATTG CCTCGAGACGGCGACTTCACTGTAAGATGGTTTGATGCAAACTATGGACCGACCCCCGCAAGAGGGACGGCGACGATGCC TCGGCTGTCATTCAAATTCCGGTTGGCAAGGAGTGAATGGGCATGA
Upstream 100 bases:
>100_bases GTAGCATTATTCTTCCGTTATTTCCTAAGGTCGGACTTGCGATGTCGCTTCTGGCTCGGGCAAGCTTTACCCAACGGAAG CTGTGGGTAAGGAATAGGCT
Downstream 100 bases:
>100_bases CCCGAATAGTTGCCGGAGGCGGTGATCATGACTAATTGGGAACAATGGGAAGGCACAATTGCCAATGCATACCTTCACTG GTTGGCGCGGCTCGACAGCA
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Protein
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSSGFFSGGAHGGAHGGAHGGAHGGAHGGAHGGAHGGAHGIMHAGGPPSSLLSHGLTVSHDGTMGYWEGDADIADPSLGQ NPGSLQYLSPDQRHQVLLAELLGVFKARSRTGSASVRVRNADIATLVPPPTNDYFVGQLKLLRGYADLRSDRHAEILAQT EDIMSFFGAIVHLNSSRREHTIEVLNLVQALCVMLEMQIKHMVRCPRPIDFSSRVQPMIQTPAHSSFPSGHAVEAYAVAT VLSDLVMSGSAPDIEKEDVTTRLRQLAHRIAANRVVAGLHFPADSAAGAFLGSQIGAAIVALTKPRQSLSQITYGNSVKL PRDGDFTVRWFDANYGPTPARGTATMPRLSFKFRLARSEWA
Sequences:
>Translated_361_residues MSSGFFSGGAHGGAHGGAHGGAHGGAHGGAHGGAHGGAHGIMHAGGPPSSLLSHGLTVSHDGTMGYWEGDADIADPSLGQ NPGSLQYLSPDQRHQVLLAELLGVFKARSRTGSASVRVRNADIATLVPPPTNDYFVGQLKLLRGYADLRSDRHAEILAQT EDIMSFFGAIVHLNSSRREHTIEVLNLVQALCVMLEMQIKHMVRCPRPIDFSSRVQPMIQTPAHSSFPSGHAVEAYAVAT VLSDLVMSGSAPDIEKEDVTTRLRQLAHRIAANRVVAGLHFPADSAAGAFLGSQIGAAIVALTKPRQSLSQITYGNSVKL PRDGDFTVRWFDANYGPTPARGTATMPRLSFKFRLARSEWA >Mature_360_residues SSGFFSGGAHGGAHGGAHGGAHGGAHGGAHGGAHGGAHGIMHAGGPPSSLLSHGLTVSHDGTMGYWEGDADIADPSLGQN PGSLQYLSPDQRHQVLLAELLGVFKARSRTGSASVRVRNADIATLVPPPTNDYFVGQLKLLRGYADLRSDRHAEILAQTE DIMSFFGAIVHLNSSRREHTIEVLNLVQALCVMLEMQIKHMVRCPRPIDFSSRVQPMIQTPAHSSFPSGHAVEAYAVATV LSDLVMSGSAPDIEKEDVTTRLRQLAHRIAANRVVAGLHFPADSAAGAFLGSQIGAAIVALTKPRQSLSQITYGNSVKLP RDGDFTVRWFDANYGPTPARGTATMPRLSFKFRLARSEWA
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38327; Mature: 38196
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGFFSGGAHGGAHGGAHGGAHGGAHGGAHGGAHGGAHGIMHAGGPPSSLLSHGLTVSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEC DGTMGYWEGDADIADPSLGQNPGSLQYLSPDQRHQVLLAELLGVFKARSRTGSASVRVRN CCCEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC ADIATLVPPPTNDYFVGQLKLLRGYADLRSDRHAEILAQTEDIMSFFGAIVHLNSSRREH CCEEEECCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH TIEVLNLVQALCVMLEMQIKHMVRCPRPIDFSSRVQPMIQTPAHSSFPSGHAVEAYAVAT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCCCCCHHHHHHHH VLSDLVMSGSAPDIEKEDVTTRLRQLAHRIAANRVVAGLHFPADSAAGAFLGSQIGAAIV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHEEE ALTKPRQSLSQITYGNSVKLPRDGDFTVRWFDANYGPTPARGTATMPRLSFKFRLARSEW EECCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCC A C >Mature Secondary Structure SSGFFSGGAHGGAHGGAHGGAHGGAHGGAHGGAHGGAHGIMHAGGPPSSLLSHGLTVSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEC DGTMGYWEGDADIADPSLGQNPGSLQYLSPDQRHQVLLAELLGVFKARSRTGSASVRVRN CCCEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC ADIATLVPPPTNDYFVGQLKLLRGYADLRSDRHAEILAQTEDIMSFFGAIVHLNSSRREH CCEEEECCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH TIEVLNLVQALCVMLEMQIKHMVRCPRPIDFSSRVQPMIQTPAHSSFPSGHAVEAYAVAT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCCCCCHHHHHHHH VLSDLVMSGSAPDIEKEDVTTRLRQLAHRIAANRVVAGLHFPADSAAGAFLGSQIGAAIV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHEEE ALTKPRQSLSQITYGNSVKLPRDGDFTVRWFDANYGPTPARGTATMPRLSFKFRLARSEW EECCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA