Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056021

Identifier: 89056021

GI number: 89056021

Start: 3588412

End: 3590451

Strand: Direct

Name: 89056021

Synonym: Jann_3530

Alternate gene names: NA

Gene position: 3588412-3590451 (Clockwise)

Preceding gene: 89056020

Following gene: 89056022

Centisome position: 83.1

GC content: 59.46

Gene sequence:

>2040_bases
ATGACTAATTGGGAACAATGGGAAGGCACAATTGCCAATGCATACCTTCACTGGTTGGCGCGGCTCGACAGCAACGGTGA
GTCAACGATCAAAGGCTCCGACGTCTGGTTTTCCCGCTTTGCTGCACAACTTTTCCCTCCTGCTGGAACCAATTCAAACA
TTGACCGTTTTAACTCGGAAGATGGCATATTGCGGGTGCTGCTTCCGCTCGCACCATATGTCGACATAAATGAACTGCCC
AATGCGACCGGCCTAAAGGCGATTGTCGGCGTCATCGACACTGATATTCCCCTTGGTCATCGCGCGTTCCGGGACGAGAA
TGGGGCGTCGCGGGTGCTGTATCATTGGCAGATGGATTTTGGTGCGACCAACAACGGCAAGAGTTTCGGCAAAGGCGAAA
TTGATCGCCTGCTTGCTAAGCACTCAGGCGGACGACTGGACGGGACGCTTGACGCCACCAGTTTCAATTCGGAAATCGGC
TCCCTCAGGATGGAAGAGCCGCGCGGTCCCCGCGCCCTCCTTAGCCGCCATTCCCATGGTGCCCACGTACTGGACCTTGC
GGCCGGGGCAAACGCCAGGGCCGCCTTGATGGGGCTGCCAGACGATCCGTTCCCCCGCGATGTTGGAATCGTAACCATCG
GCATCCCACCGCGCTGGGATTTCGGGGAAGCGGGCGAATTGTTGGACCTGATGATGCTTCTCGCCGTCAACCAGGTGTCG
GATGTCGTTAGCAAGCTTTGGACAAAGGCGCACGGCGCGCCAAGCAAGCCAAGCGTGGGGATGGTTGGTTTTCCGACCGT
CATCAACCTGGCCTTTGGTCGACAGGCCGGTTCGAAACGAAACGACGGCGGTTGGTTCCCGGTGGTGCTTGCAGAAATCA
AGAAGGACGTCACATCCAACCGGGGAACGCAACCCGCACCATTTGAAGTCATCATGCCGGCCGGCAACGATAACCTCGGA
AGGGTTGCAGCACGCTACGAGCTTGACCCAAATACGGAAGTTCAGATCCCCTGGCAAATTCTTCCTAGTGACCAGACCGA
CAACTTCGTCGAGGTATGGGCGGAAGGAACCGGAAGACGAAGCGCCACGCCAAGGTTGGAAATTGAATTGATCGCGCCGG
GGGACCGACGTTCGGTGCCGATTGAAGGGCCACTTGGAAAGTATCTGGATGTATTAGACGACGGCAACCGGTTCGCCGCG
CGCATCTACCGGCTGCGAGAGCCTGCGAAGGTGGACGCAGACGCAAGAAAACGACCCGGCTACCTTTTTGCACTTGGCCC
CAGTGAGCCGCGGTCAGAGGCCTTGGGTGCCGTACCATCGGGAGCGTGGACCCTGTATTTACGTAATGCCGGCTCAGAAA
AGCTGCTTGTCGAGGTCTCGGTTCAGACTGACCAGTCGGTGTTGCCATTGGCGGGATCATCTGGTCGATCCTACTTGGAT
GAACGGACCTATGAGGTCTTTGATGAGGCGGGCCGACTGAATGATGCGGTCCGGTGGGACGACGTCGCGCAAGAGTGGGT
CCGCGACGAAGGATACGCCGGTGTGTTGCGGCACGGCACGATCAACGCGGCGGCAAGTCACGCAGTGGCCGAAACTGTGG
GAGGGTACCGGCAATCGGACGGCATGCCGGCAAGCTACTCAGCCACTGGAAGCGGGCTCGAATCCGGGCACACGCCACCG
AACCGCTCTGCCCCTAATTGCAGCCTAACCACCGACACGTCTGCTGTGTTGCCCGGGACATTAGCCGCCGCTGCGGGCGA
TGGATGCAGAGTGGCCATGCGCGGTACGAGTTTCGCGTCCGCCCGCGCAACCCGTATCGTGGCCGAAGCTTGGCGCGCCG
CGACTGTCACGCCCCTTGATACGGCGGCCGCGATCCTTGAGCGGGCCGCGAGTCAACACGAGGCGACAGATCCTTTTCCG
CATCGACCCTACTCACACAATACGACGGCCCATGAAGCGGCCTATCCGAAGTTCGGGTATGGACGCACCCCTCCGCCGGA
AACAGATGGTTCCGGTAATCCGCCGCGCAGGGAGAAATGA

Upstream 100 bases:

>100_bases
CCCCGCAAGAGGGACGGCGACGATGCCTCGGCTGTCATTCAAATTCCGGTTGGCAAGGAGTGAATGGGCATGACCCGAAT
AGTTGCCGGAGGCGGTGATC

Downstream 100 bases:

>100_bases
TCCGATAATGTTAGGATTGCCAAGATGAACCGGCGTCGCAAATGCGATGCCGGTTTTTTCTTTTTTGCAGAGACGGAAAA
CACAACAGAATCGGAATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 679; Mature: 678

Protein sequence:

>679_residues
MTNWEQWEGTIANAYLHWLARLDSNGESTIKGSDVWFSRFAAQLFPPAGTNSNIDRFNSEDGILRVLLPLAPYVDINELP
NATGLKAIVGVIDTDIPLGHRAFRDENGASRVLYHWQMDFGATNNGKSFGKGEIDRLLAKHSGGRLDGTLDATSFNSEIG
SLRMEEPRGPRALLSRHSHGAHVLDLAAGANARAALMGLPDDPFPRDVGIVTIGIPPRWDFGEAGELLDLMMLLAVNQVS
DVVSKLWTKAHGAPSKPSVGMVGFPTVINLAFGRQAGSKRNDGGWFPVVLAEIKKDVTSNRGTQPAPFEVIMPAGNDNLG
RVAARYELDPNTEVQIPWQILPSDQTDNFVEVWAEGTGRRSATPRLEIELIAPGDRRSVPIEGPLGKYLDVLDDGNRFAA
RIYRLREPAKVDADARKRPGYLFALGPSEPRSEALGAVPSGAWTLYLRNAGSEKLLVEVSVQTDQSVLPLAGSSGRSYLD
ERTYEVFDEAGRLNDAVRWDDVAQEWVRDEGYAGVLRHGTINAAASHAVAETVGGYRQSDGMPASYSATGSGLESGHTPP
NRSAPNCSLTTDTSAVLPGTLAAAAGDGCRVAMRGTSFASARATRIVAEAWRAATVTPLDTAAAILERAASQHEATDPFP
HRPYSHNTTAHEAAYPKFGYGRTPPPETDGSGNPPRREK

Sequences:

>Translated_679_residues
MTNWEQWEGTIANAYLHWLARLDSNGESTIKGSDVWFSRFAAQLFPPAGTNSNIDRFNSEDGILRVLLPLAPYVDINELP
NATGLKAIVGVIDTDIPLGHRAFRDENGASRVLYHWQMDFGATNNGKSFGKGEIDRLLAKHSGGRLDGTLDATSFNSEIG
SLRMEEPRGPRALLSRHSHGAHVLDLAAGANARAALMGLPDDPFPRDVGIVTIGIPPRWDFGEAGELLDLMMLLAVNQVS
DVVSKLWTKAHGAPSKPSVGMVGFPTVINLAFGRQAGSKRNDGGWFPVVLAEIKKDVTSNRGTQPAPFEVIMPAGNDNLG
RVAARYELDPNTEVQIPWQILPSDQTDNFVEVWAEGTGRRSATPRLEIELIAPGDRRSVPIEGPLGKYLDVLDDGNRFAA
RIYRLREPAKVDADARKRPGYLFALGPSEPRSEALGAVPSGAWTLYLRNAGSEKLLVEVSVQTDQSVLPLAGSSGRSYLD
ERTYEVFDEAGRLNDAVRWDDVAQEWVRDEGYAGVLRHGTINAAASHAVAETVGGYRQSDGMPASYSATGSGLESGHTPP
NRSAPNCSLTTDTSAVLPGTLAAAAGDGCRVAMRGTSFASARATRIVAEAWRAATVTPLDTAAAILERAASQHEATDPFP
HRPYSHNTTAHEAAYPKFGYGRTPPPETDGSGNPPRREK
>Mature_678_residues
TNWEQWEGTIANAYLHWLARLDSNGESTIKGSDVWFSRFAAQLFPPAGTNSNIDRFNSEDGILRVLLPLAPYVDINELPN
ATGLKAIVGVIDTDIPLGHRAFRDENGASRVLYHWQMDFGATNNGKSFGKGEIDRLLAKHSGGRLDGTLDATSFNSEIGS
LRMEEPRGPRALLSRHSHGAHVLDLAAGANARAALMGLPDDPFPRDVGIVTIGIPPRWDFGEAGELLDLMMLLAVNQVSD
VVSKLWTKAHGAPSKPSVGMVGFPTVINLAFGRQAGSKRNDGGWFPVVLAEIKKDVTSNRGTQPAPFEVIMPAGNDNLGR
VAARYELDPNTEVQIPWQILPSDQTDNFVEVWAEGTGRRSATPRLEIELIAPGDRRSVPIEGPLGKYLDVLDDGNRFAAR
IYRLREPAKVDADARKRPGYLFALGPSEPRSEALGAVPSGAWTLYLRNAGSEKLLVEVSVQTDQSVLPLAGSSGRSYLDE
RTYEVFDEAGRLNDAVRWDDVAQEWVRDEGYAGVLRHGTINAAASHAVAETVGGYRQSDGMPASYSATGSGLESGHTPPN
RSAPNCSLTTDTSAVLPGTLAAAAGDGCRVAMRGTSFASARATRIVAEAWRAATVTPLDTAAAILERAASQHEATDPFPH
RPYSHNTTAHEAAYPKFGYGRTPPPETDGSGNPPRREK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73193; Mature: 73062

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNWEQWEGTIANAYLHWLARLDSNGESTIKGSDVWFSRFAAQLFPPAGTNSNIDRFNSE
CCCHHHHCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
DGILRVLLPLAPYVDINELPNATGLKAIVGVIDTDIPLGHRAFRDENGASRVLYHWQMDF
CCCEEEEEHHCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEEEECC
GATNNGKSFGKGEIDRLLAKHSGGRLDGTLDATSFNSEIGSLRMEEPRGPRALLSRHSHG
CCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHCCEEECCCCCCHHHHHCCCCC
AHVLDLAAGANARAALMGLPDDPFPRDVGIVTIGIPPRWDFGEAGELLDLMMLLAVNQVS
CEEEEEECCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
DVVSKLWTKAHGAPSKPSVGMVGFPTVINLAFGRQAGSKRNDGGWFPVVLAEIKKDVTSN
HHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
RGTQPAPFEVIMPAGNDNLGRVAARYELDPNTEVQIPWQILPSDQTDNFVEVWAEGTGRR
CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCC
SATPRLEIELIAPGDRRSVPIEGPLGKYLDVLDDGNRFAARIYRLREPAKVDADARKRPG
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC
YLFALGPSEPRSEALGAVPSGAWTLYLRNAGSEKLLVEVSVQTDQSVLPLAGSSGRSYLD
EEEEECCCCCHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHH
ERTYEVFDEAGRLNDAVRWDDVAQEWVRDEGYAGVLRHGTINAAASHAVAETVGGYRQSD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCC
GMPASYSATGSGLESGHTPPNRSAPNCSLTTDTSAVLPGTLAAAAGDGCRVAMRGTSFAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHCCCHHHHHCCCCCEEEEECCCHHH
ARATRIVAEAWRAATVTPLDTAAAILERAASQHEATDPFPHRPYSHNTTAHEAAYPKFGY
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCC
GRTPPPETDGSGNPPRREK
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNWEQWEGTIANAYLHWLARLDSNGESTIKGSDVWFSRFAAQLFPPAGTNSNIDRFNSE
CCHHHHCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
DGILRVLLPLAPYVDINELPNATGLKAIVGVIDTDIPLGHRAFRDENGASRVLYHWQMDF
CCCEEEEEHHCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEEEECC
GATNNGKSFGKGEIDRLLAKHSGGRLDGTLDATSFNSEIGSLRMEEPRGPRALLSRHSHG
CCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHCCEEECCCCCCHHHHHCCCCC
AHVLDLAAGANARAALMGLPDDPFPRDVGIVTIGIPPRWDFGEAGELLDLMMLLAVNQVS
CEEEEEECCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
DVVSKLWTKAHGAPSKPSVGMVGFPTVINLAFGRQAGSKRNDGGWFPVVLAEIKKDVTSN
HHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
RGTQPAPFEVIMPAGNDNLGRVAARYELDPNTEVQIPWQILPSDQTDNFVEVWAEGTGRR
CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCC
SATPRLEIELIAPGDRRSVPIEGPLGKYLDVLDDGNRFAARIYRLREPAKVDADARKRPG
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC
YLFALGPSEPRSEALGAVPSGAWTLYLRNAGSEKLLVEVSVQTDQSVLPLAGSSGRSYLD
EEEEECCCCCHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHH
ERTYEVFDEAGRLNDAVRWDDVAQEWVRDEGYAGVLRHGTINAAASHAVAETVGGYRQSD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCC
GMPASYSATGSGLESGHTPPNRSAPNCSLTTDTSAVLPGTLAAAAGDGCRVAMRGTSFAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHCCCHHHHHCCCCCEEEEECCCHHH
ARATRIVAEAWRAATVTPLDTAAAILERAASQHEATDPFPHRPYSHNTTAHEAAYPKFGY
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCC
GRTPPPETDGSGNPPRREK
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA