Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056016

Identifier: 89056016

GI number: 89056016

Start: 3583605

End: 3584162

Strand: Direct

Name: 89056016

Synonym: Jann_3525

Alternate gene names: NA

Gene position: 3583605-3584162 (Clockwise)

Preceding gene: 89056015

Following gene: 89056020

Centisome position: 82.99

GC content: 47.13

Gene sequence:

>558_bases
TTGATCGAAGAAGAAGGGGGGCGCATCGAAAAAAATGTTTCTGAACTCATTGGGCCTGAATTCGTACAAAAGCCCATATT
CATTCTGAATGGACAGGTTTTTCCTAATCCTGTCTTGTTCTCGAATTCAAGCATCCAGACTCCGGTTCTTCGCCCTCTTC
TGGGACCCGTGCATGGTGATTGCCATAGCCAAAACGTATTTGTAAAGGCCGGCAAAGATTCCTCAGTTCTTGACCTAAGT
ATTATTGACTTAGCAACATTCCAACCCGACTCACCGATATTTTTCGATCATGCGTACTTAGAGCTTGCAACATTGCTCCG
AAAGCTGAACCAGTTGGGGGAGCGCCGTTGGTGCAATTTGGTGGAAGGCCTATCCAAAGAGTGTTCAGAGCAAAAAGTCG
AGCCTAGCGAACGCGGATGGCTCGAGGACATTTTGGCTGCTCGCAAAGATGTTTTCCGATTGGCGGATGAGCAATATCCT
GACCGACAAGACGATTTGCGCCTGCAATTTCTGCTTGCTCAAGTCAGCGCTGGTTTAGCTTTCCTGCACAAAATTTGA

Upstream 100 bases:

>100_bases
CCTACATTGAATTTTCAAAGGCAGCCTGGACGCCAGACCTTTTTTTCTCGGAGATCAGCGCTCTGCCGTACAAGTAATTT
CCAATATACTGGGATACAAA

Downstream 100 bases:

>100_bases
CCTGCTCCCCTTGGAGTCCGCTAATTTAGGTTAGCACTGTTCAGGTTCTGGTCTTCCTTTGACCGGTTAGCATATTCGTG
TGGCGTCAGGCCAGCGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MIEEEGGRIEKNVSELIGPEFVQKPIFILNGQVFPNPVLFSNSSIQTPVLRPLLGPVHGDCHSQNVFVKAGKDSSVLDLS
IIDLATFQPDSPIFFDHAYLELATLLRKLNQLGERRWCNLVEGLSKECSEQKVEPSERGWLEDILAARKDVFRLADEQYP
DRQDDLRLQFLLAQVSAGLAFLHKI

Sequences:

>Translated_185_residues
MIEEEGGRIEKNVSELIGPEFVQKPIFILNGQVFPNPVLFSNSSIQTPVLRPLLGPVHGDCHSQNVFVKAGKDSSVLDLS
IIDLATFQPDSPIFFDHAYLELATLLRKLNQLGERRWCNLVEGLSKECSEQKVEPSERGWLEDILAARKDVFRLADEQYP
DRQDDLRLQFLLAQVSAGLAFLHKI
>Mature_185_residues
MIEEEGGRIEKNVSELIGPEFVQKPIFILNGQVFPNPVLFSNSSIQTPVLRPLLGPVHGDCHSQNVFVKAGKDSSVLDLS
IIDLATFQPDSPIFFDHAYLELATLLRKLNQLGERRWCNLVEGLSKECSEQKVEPSERGWLEDILAARKDVFRLADEQYP
DRQDDLRLQFLLAQVSAGLAFLHKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20884; Mature: 20884

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEEEGGRIEKNVSELIGPEFVQKPIFILNGQVFPNPVLFSNSSIQTPVLRPLLGPVHGD
CCCCCCCCHHHHHHHHHCHHHHHCCEEEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCC
CHSQNVFVKAGKDSSVLDLSIIDLATFQPDSPIFFDHAYLELATLLRKLNQLGERRWCNL
CCCCCEEEEECCCCCEEEEEEHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VEGLSKECSEQKVEPSERGWLEDILAARKDVFRLADEQYPDRQDDLRLQFLLAQVSAGLA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FLHKI
HHHCC
>Mature Secondary Structure
MIEEEGGRIEKNVSELIGPEFVQKPIFILNGQVFPNPVLFSNSSIQTPVLRPLLGPVHGD
CCCCCCCCHHHHHHHHHCHHHHHCCEEEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCC
CHSQNVFVKAGKDSSVLDLSIIDLATFQPDSPIFFDHAYLELATLLRKLNQLGERRWCNL
CCCCCEEEEECCCCCEEEEEEHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VEGLSKECSEQKVEPSERGWLEDILAARKDVFRLADEQYPDRQDDLRLQFLLAQVSAGLA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FLHKI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA