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The map label for this gene is qseC [H]

Identifier: 89055983

GI number: 89055983

Start: 3545380

End: 3546750

Strand: Direct

Name: qseC [H]

Synonym: Jann_3492

Alternate gene names: 89055983

Gene position: 3545380-3546750 (Clockwise)

Preceding gene: 89055982

Following gene: 89055984

Centisome position: 82.11

GC content: 68.13

Gene sequence:

>1371_bases
ATGAGCGTTCAACCGGGCTGGCCCATCGCGCGGAAACTAACGATGTTTCTGGCAGGGATCGTGGCGCTTCTGGCGTTGGT
CAGCTGGGGGATGGTGACGTCGTTCGCACGGGAAGCGGCGGGGCGGACGCAGGACAACGTTCTTGCGGCCTCGGCCACAT
CTATCGCCGAAACGCTACGGTCGGAGGGGGGAGAGGTGCGGCTGGAACTGCCCTATGCGGCCTTCTCCATGCTCGGCGCG
ATCAGCGAGGACAGGGTGTTCTACCGCGTGGCGACGGGCGATGAGGTGCTGACCGGCTACGCGGATCTGGACGGGCCGGA
CGTGGCCCCGGGAGAGGTCCGGTTTGCGACGCTCAGCTACCGCGACGCCCCGGTACGTGTCGTCTCTGTCATGCGGGTGA
TCTTGTCCGACGGGGAAGCGGTGCCCATCACGGTCACGCTGGCGCAAACCCGTGACGGCGTGCAGGGGATCGCGGCGGGG
CTGTCGCGGCAGGCGGCGGTTCTGTCAGTCGTCGTGTTCCTGCTGGCCGTGGGCCTGTCGGCCTATGCGGTCCGGCGGTC
CCTGCAACCGCTCAACACCATGGCCCAGAACGTGGCCACGCGCGGGCCATCCGACCTGCGGCCCTTGCGGCGGCGTGGCC
CGCCGGAGCTGATGCCGCTGGTGGGTGCGTTGAACCGGCTGATGGAGCGCCTGGGCGGGTCGATCAAACGGTCCGAAGAT
TTCATCGCCGAGGCCGCCCACAGAGTGCGCACACCGCTGGCCATCGTGCGCACGCAGGCCGAGATTGCCCTGCATTCGGT
GGAGGAGGAGGCGCAGAAGCAGACGCTGCGCCGGGTGATCCGGGCGGTGGACGATTCCTCCCGCTCCGCCTCGCAGCTTT
TGGACCACGCCATGGTGTCCTTCCGGGCCGATGATCTGACGCGCGAACGGGTGGATCTGGCGGGGTTGGCCCAAGGGGTG
GCCGATGCACTGCGACCCACGGCAGAGATGAAGGACATCGACATCGCGATGGATCTGGACCGCGCGGCAGTCGAAGGCGA
CGCGATCCTGCTGCAGAACGCCCTGCGCAACGTGTTGGACAACGCCATCAAATATTCGCCTGCCGAGACGGTCGTGCACG
TCGATGTGGCGGCACAGGACGGCGAGGCGCTGGTACGGGTGAGCGACCAGGGCGCGGGCTTCGGGGACGGCCCGGCCGCA
CATCTGGCAGAGCGGTTCACGCGCGGGGACAAGGTGGAGGGGATCGTCGGATCGGGCCTTGGCCTGACCATCGCGGACGA
GGCGCTGCGCGCCCATGGCGGGCGGCTCGAACTGGGGTGTTCAGACGAAGGGAGCGGGGCATGTGTGCGGCTGATATTGC
CTGCGGCCTGA

Upstream 100 bases:

>100_bases
AGAATGCGATTGAGGTCTATGTCGGGCGTTTGCGGCGCAAGCTGGACGAGGTCGGCGTGAAGATCGAAACGGTGCGCGGG
GCGGGCTACCGGATCAGCCG

Downstream 100 bases:

>100_bases
GGCGCGCCTTCGGCGCTGTTCTGTTAGCCGCCTTCGGCGCGCTCCTCCTCGCTCCGCTCCTCGCAGCGGCGGTGAACGCG
CAGGACTACGAGATTGAGGA

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MSVQPGWPIARKLTMFLAGIVALLALVSWGMVTSFAREAAGRTQDNVLAASATSIAETLRSEGGEVRLELPYAAFSMLGA
ISEDRVFYRVATGDEVLTGYADLDGPDVAPGEVRFATLSYRDAPVRVVSVMRVILSDGEAVPITVTLAQTRDGVQGIAAG
LSRQAAVLSVVVFLLAVGLSAYAVRRSLQPLNTMAQNVATRGPSDLRPLRRRGPPELMPLVGALNRLMERLGGSIKRSED
FIAEAAHRVRTPLAIVRTQAEIALHSVEEEAQKQTLRRVIRAVDDSSRSASQLLDHAMVSFRADDLTRERVDLAGLAQGV
ADALRPTAEMKDIDIAMDLDRAAVEGDAILLQNALRNVLDNAIKYSPAETVVHVDVAAQDGEALVRVSDQGAGFGDGPAA
HLAERFTRGDKVEGIVGSGLGLTIADEALRAHGGRLELGCSDEGSGACVRLILPAA

Sequences:

>Translated_456_residues
MSVQPGWPIARKLTMFLAGIVALLALVSWGMVTSFAREAAGRTQDNVLAASATSIAETLRSEGGEVRLELPYAAFSMLGA
ISEDRVFYRVATGDEVLTGYADLDGPDVAPGEVRFATLSYRDAPVRVVSVMRVILSDGEAVPITVTLAQTRDGVQGIAAG
LSRQAAVLSVVVFLLAVGLSAYAVRRSLQPLNTMAQNVATRGPSDLRPLRRRGPPELMPLVGALNRLMERLGGSIKRSED
FIAEAAHRVRTPLAIVRTQAEIALHSVEEEAQKQTLRRVIRAVDDSSRSASQLLDHAMVSFRADDLTRERVDLAGLAQGV
ADALRPTAEMKDIDIAMDLDRAAVEGDAILLQNALRNVLDNAIKYSPAETVVHVDVAAQDGEALVRVSDQGAGFGDGPAA
HLAERFTRGDKVEGIVGSGLGLTIADEALRAHGGRLELGCSDEGSGACVRLILPAA
>Mature_455_residues
SVQPGWPIARKLTMFLAGIVALLALVSWGMVTSFAREAAGRTQDNVLAASATSIAETLRSEGGEVRLELPYAAFSMLGAI
SEDRVFYRVATGDEVLTGYADLDGPDVAPGEVRFATLSYRDAPVRVVSVMRVILSDGEAVPITVTLAQTRDGVQGIAAGL
SRQAAVLSVVVFLLAVGLSAYAVRRSLQPLNTMAQNVATRGPSDLRPLRRRGPPELMPLVGALNRLMERLGGSIKRSEDF
IAEAAHRVRTPLAIVRTQAEIALHSVEEEAQKQTLRRVIRAVDDSSRSASQLLDHAMVSFRADDLTRERVDLAGLAQGVA
DALRPTAEMKDIDIAMDLDRAAVEGDAILLQNALRNVLDNAIKYSPAETVVHVDVAAQDGEALVRVSDQGAGFGDGPAAH
LAERFTRGDKVEGIVGSGLGLTIADEALRAHGGRLELGCSDEGSGACVRLILPAA

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=263, Percent_Identity=32.319391634981, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1786783, Length=334, Percent_Identity=27.8443113772455, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790551, Length=291, Percent_Identity=30.2405498281787, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1788279, Length=304, Percent_Identity=26.6447368421053, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1786912, Length=216, Percent_Identity=27.7777777777778, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1790861, Length=280, Percent_Identity=26.0714285714286, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI87082128, Length=295, Percent_Identity=26.1016949152542, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789808, Length=291, Percent_Identity=24.7422680412371, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1788393, Length=242, Percent_Identity=26.8595041322314, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=26.4069264069264, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787374, Length=318, Percent_Identity=26.4150943396226, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1788549, Length=220, Percent_Identity=24.0909090909091, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48396; Mature: 48265

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQPGWPIARKLTMFLAGIVALLALVSWGMVTSFAREAAGRTQDNVLAASATSIAETLR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SEGGEVRLELPYAAFSMLGAISEDRVFYRVATGDEVLTGYADLDGPDVAPGEVRFATLSY
CCCCEEEEECCHHHHHHHHCCCCCCEEEEEECCCHHEECCCCCCCCCCCCCCEEEEEEEC
RDAPVRVVSVMRVILSDGEAVPITVTLAQTRDGVQGIAAGLSRQAAVLSVVVFLLAVGLS
CCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYAVRRSLQPLNTMAQNVATRGPSDLRPLRRRGPPELMPLVGALNRLMERLGGSIKRSED
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
FIAEAAHRVRTPLAIVRTQAEIALHSVEEEAQKQTLRRVIRAVDDSSRSASQLLDHAMVS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FRADDLTRERVDLAGLAQGVADALRPTAEMKDIDIAMDLDRAAVEGDAILLQNALRNVLD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCHHHHCCCHHHHHHHHHHHHH
NAIKYSPAETVVHVDVAAQDGEALVRVSDQGAGFGDGPAAHLAERFTRGDKVEGIVGSGL
HHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCC
GLTIADEALRAHGGRLELGCSDEGSGACVRLILPAA
CCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
SVQPGWPIARKLTMFLAGIVALLALVSWGMVTSFAREAAGRTQDNVLAASATSIAETLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SEGGEVRLELPYAAFSMLGAISEDRVFYRVATGDEVLTGYADLDGPDVAPGEVRFATLSY
CCCCEEEEECCHHHHHHHHCCCCCCEEEEEECCCHHEECCCCCCCCCCCCCCEEEEEEEC
RDAPVRVVSVMRVILSDGEAVPITVTLAQTRDGVQGIAAGLSRQAAVLSVVVFLLAVGLS
CCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYAVRRSLQPLNTMAQNVATRGPSDLRPLRRRGPPELMPLVGALNRLMERLGGSIKRSED
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
FIAEAAHRVRTPLAIVRTQAEIALHSVEEEAQKQTLRRVIRAVDDSSRSASQLLDHAMVS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FRADDLTRERVDLAGLAQGVADALRPTAEMKDIDIAMDLDRAAVEGDAILLQNALRNVLD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCHHHHCCCHHHHHHHHHHHHH
NAIKYSPAETVVHVDVAAQDGEALVRVSDQGAGFGDGPAAHLAERFTRGDKVEGIVGSGL
HHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCC
GLTIADEALRAHGGRLELGCSDEGSGACVRLILPAA
CCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]