Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055984

Identifier: 89055984

GI number: 89055984

Start: 3546720

End: 3547796

Strand: Direct

Name: 89055984

Synonym: Jann_3493

Alternate gene names: NA

Gene position: 3546720-3547796 (Clockwise)

Preceding gene: 89055983

Following gene: 89055986

Centisome position: 82.14

GC content: 66.57

Gene sequence:

>1077_bases
ATGTGTGCGGCTGATATTGCCTGCGGCCTGAGGCGCGCCTTCGGCGCTGTTCTGTTAGCCGCCTTCGGCGCGCTCCTCCT
CGCTCCGCTCCTCGCAGCGGCGGTGAACGCGCAGGACTACGAGATTGAGGATCGCCGGGAGTATCCCGGGACGGGCGCGG
CTTTGCTGCGGGTGATCTCCACCGCTGATCTGGATGTGTTCGAGCCGTTTTTGCTGCGTTTTCAAGAGGGCAACCCGGAG
GTAGGCATTGATTACATCGCCGTCTCCTCGGCCGAGCTGAACCGTGCGATCCGGGGCGGGGCGGCGTTTGATCTGGCGCT
GTCGTCGGCCATGGATCTGCAATTCACGCTGGCCAATGACGGCTACGCCCAAAGCTATGCCAGCAGCGTCACGGCGGGCC
TGCCCGATTGGGCGCGGTGGAACGACCAGCTATTCGCCTTCACCGCAGAACCCGCGGTAATCGTCATCAACGAGGCGCGA
TTTGAGGGCTTGCCCCTGCCCCGCACCCGCGCGGAACTGGTGACGCTTCTGCGCGACAACGCGGACCGGTTCGCGGGCCG
GTTGGGGACCTATGATTTGCGCGCCTCGGGCCTTGGGTATCTGTTCGCAACCCAGGAGGCGCGGTCGTCCGACGCCTATT
GGCGGTTGACGGAGGTGATGGGGCGGCTGGATGCGCAGCTTTACTGCTGCTCCAGCCAGATGATCGACGCGGTGGCCAGC
GGGGAGTTGGCGCTGGCCTACAACGTCCTGGGCTCCTATGCGGCGCAGCGGCTGAACACGGACGCGGGCCTTGCGGTGCT
GCCGTTCGAGGACTTCGCCAATGTCATGCTGCGCACGGCGTTGATCCCAGCGACCGCGACCGAAGTGGACGCAGCCGGGG
CCATGCTGGACGCGTTGCTGCGCGAAGGGATGGGAGAGGGCTCTGCCGCGCCGGTCCTGCCCCCCCTGCAATCGCGCGAC
GACGCCGAGGGGTCGCCCTTCGGGCCGATCCGCCTGGGGCCGGCCCTGATGGTCTACCTGGATCGGCTGAACCGGGAGAG
CTTTCTCGCCGCCTGGGACGCAGCGATGGAACAGTAA

Upstream 100 bases:

>100_bases
GGATCGTCGGATCGGGCCTTGGCCTGACCATCGCGGACGAGGCGCTGCGCGCCCATGGCGGGCGGCTCGAACTGGGGTGT
TCAGACGAAGGGAGCGGGGC

Downstream 100 bases:

>100_bases
CGCACCTTCGGTGCAACTGCTCAACGCACCTTCGGTGCAACTGCTCAACGCACCTGCGGTGCAACTGCTCAACGCACCTG
CGGTGCAACTGCTCAACGCA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC-Type Fe3+ Transporter Periplasmic Protein; Iron ABC Transporter; HAMP Domain-Containing; Two-Component Sensor Histidine Kinase

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MCAADIACGLRRAFGAVLLAAFGALLLAPLLAAAVNAQDYEIEDRREYPGTGAALLRVISTADLDVFEPFLLRFQEGNPE
VGIDYIAVSSAELNRAIRGGAAFDLALSSAMDLQFTLANDGYAQSYASSVTAGLPDWARWNDQLFAFTAEPAVIVINEAR
FEGLPLPRTRAELVTLLRDNADRFAGRLGTYDLRASGLGYLFATQEARSSDAYWRLTEVMGRLDAQLYCCSSQMIDAVAS
GELALAYNVLGSYAAQRLNTDAGLAVLPFEDFANVMLRTALIPATATEVDAAGAMLDALLREGMGEGSAAPVLPPLQSRD
DAEGSPFGPIRLGPALMVYLDRLNRESFLAAWDAAMEQ

Sequences:

>Translated_358_residues
MCAADIACGLRRAFGAVLLAAFGALLLAPLLAAAVNAQDYEIEDRREYPGTGAALLRVISTADLDVFEPFLLRFQEGNPE
VGIDYIAVSSAELNRAIRGGAAFDLALSSAMDLQFTLANDGYAQSYASSVTAGLPDWARWNDQLFAFTAEPAVIVINEAR
FEGLPLPRTRAELVTLLRDNADRFAGRLGTYDLRASGLGYLFATQEARSSDAYWRLTEVMGRLDAQLYCCSSQMIDAVAS
GELALAYNVLGSYAAQRLNTDAGLAVLPFEDFANVMLRTALIPATATEVDAAGAMLDALLREGMGEGSAAPVLPPLQSRD
DAEGSPFGPIRLGPALMVYLDRLNRESFLAAWDAAMEQ
>Mature_358_residues
MCAADIACGLRRAFGAVLLAAFGALLLAPLLAAAVNAQDYEIEDRREYPGTGAALLRVISTADLDVFEPFLLRFQEGNPE
VGIDYIAVSSAELNRAIRGGAAFDLALSSAMDLQFTLANDGYAQSYASSVTAGLPDWARWNDQLFAFTAEPAVIVINEAR
FEGLPLPRTRAELVTLLRDNADRFAGRLGTYDLRASGLGYLFATQEARSSDAYWRLTEVMGRLDAQLYCCSSQMIDAVAS
GELALAYNVLGSYAAQRLNTDAGLAVLPFEDFANVMLRTALIPATATEVDAAGAMLDALLREGMGEGSAAPVLPPLQSRD
DAEGSPFGPIRLGPALMVYLDRLNRESFLAAWDAAMEQ

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38384; Mature: 38384

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAADIACGLRRAFGAVLLAAFGALLLAPLLAAAVNAQDYEIEDRREYPGTGAALLRVIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
TADLDVFEPFLLRFQEGNPEVGIDYIAVSSAELNRAIRGGAAFDLALSSAMDLQFTLAND
HCCCHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHHCCCCEEEEECCC
GYAQSYASSVTAGLPDWARWNDQLFAFTAEPAVIVINEARFEGLPLPRTRAELVTLLRDN
CHHHHHHHHHHCCCCCHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
ADRFAGRLGTYDLRASGLGYLFATQEARSSDAYWRLTEVMGRLDAQLYCCSSQMIDAVAS
HHHHHHCCCCCEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCHHEEEHHHHHHHHHHC
GELALAYNVLGSYAAQRLNTDAGLAVLPFEDFANVMLRTALIPATATEVDAAGAMLDALL
CCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
REGMGEGSAAPVLPPLQSRDDAEGSPFGPIRLGPALMVYLDRLNRESFLAAWDAAMEQ
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCC
>Mature Secondary Structure
MCAADIACGLRRAFGAVLLAAFGALLLAPLLAAAVNAQDYEIEDRREYPGTGAALLRVIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
TADLDVFEPFLLRFQEGNPEVGIDYIAVSSAELNRAIRGGAAFDLALSSAMDLQFTLAND
HCCCHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHHCCCCEEEEECCC
GYAQSYASSVTAGLPDWARWNDQLFAFTAEPAVIVINEARFEGLPLPRTRAELVTLLRDN
CHHHHHHHHHHCCCCCHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
ADRFAGRLGTYDLRASGLGYLFATQEARSSDAYWRLTEVMGRLDAQLYCCSSQMIDAVAS
HHHHHHCCCCCEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCHHEEEHHHHHHHHHHC
GELALAYNVLGSYAAQRLNTDAGLAVLPFEDFANVMLRTALIPATATEVDAAGAMLDALL
CCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
REGMGEGSAAPVLPPLQSRDDAEGSPFGPIRLGPALMVYLDRLNRESFLAAWDAAMEQ
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA