| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055945
Identifier: 89055945
GI number: 89055945
Start: 3501722
End: 3502009
Strand: Direct
Name: 89055945
Synonym: Jann_3454
Alternate gene names: NA
Gene position: 3501722-3502009 (Clockwise)
Preceding gene: 89055944
Following gene: 89055946
Centisome position: 81.1
GC content: 59.03
Gene sequence:
>288_bases TTGACCGGAGAAAGCCCCATGTCCCTCCTCTCCAAACTCTTCGGCTCCAAGCCCAAACCTCAAGCCGAACCCACCCTCCA CAACGACTACCGGATTTTCCCTGAGCCTGTGCAGGCCCAGGGCGGTTTTCAGGTGCAGGCCCGGATCGAGAAGGACGTGG ATGGTGAGACCAAGACCCACCAGATGATCCGCGCCGACAAATGCCAGTCCATGGACGAGGCGTCAGAGACCGCGCTGTTC AAGGCCAAGATGTTGATCGACCAACAGGGCGACAGCATTTTCCGGTGA
Upstream 100 bases:
>100_bases TAGCCTACCTTTTCAGTAGCTTACACCCCTGCTCAAGCTTGAGCAGGCCCGCTCACCTTCCCCTCCGCGCGCAATCGCTC TATCGTCTAGCCCAACCCAA
Downstream 100 bases:
>100_bases GCGCGCGCCACATCTCCGACCTGCCCCCGGCGCTGCAAGCGAGGCTCCAGGGCCGTGATCTAATCGTTTTCGACGGCGAA TGCGTGCTGTGTTCCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MTGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTHQMIRADKCQSMDEASETALF KAKMLIDQQGDSIFR
Sequences:
>Translated_95_residues MTGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTHQMIRADKCQSMDEASETALF KAKMLIDQQGDSIFR >Mature_94_residues TGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTHQMIRADKCQSMDEASETALFK AKMLIDQQGDSIFR
Specific function: Unknown
COG id: COG5453
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10657; Mature: 10526
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTH CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCHHHH QMIRADKCQSMDEASETALFKAKMLIDQQGDSIFR HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTH CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCHHHH QMIRADKCQSMDEASETALFKAKMLIDQQGDSIFR HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA