Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055945

Identifier: 89055945

GI number: 89055945

Start: 3501722

End: 3502009

Strand: Direct

Name: 89055945

Synonym: Jann_3454

Alternate gene names: NA

Gene position: 3501722-3502009 (Clockwise)

Preceding gene: 89055944

Following gene: 89055946

Centisome position: 81.1

GC content: 59.03

Gene sequence:

>288_bases
TTGACCGGAGAAAGCCCCATGTCCCTCCTCTCCAAACTCTTCGGCTCCAAGCCCAAACCTCAAGCCGAACCCACCCTCCA
CAACGACTACCGGATTTTCCCTGAGCCTGTGCAGGCCCAGGGCGGTTTTCAGGTGCAGGCCCGGATCGAGAAGGACGTGG
ATGGTGAGACCAAGACCCACCAGATGATCCGCGCCGACAAATGCCAGTCCATGGACGAGGCGTCAGAGACCGCGCTGTTC
AAGGCCAAGATGTTGATCGACCAACAGGGCGACAGCATTTTCCGGTGA

Upstream 100 bases:

>100_bases
TAGCCTACCTTTTCAGTAGCTTACACCCCTGCTCAAGCTTGAGCAGGCCCGCTCACCTTCCCCTCCGCGCGCAATCGCTC
TATCGTCTAGCCCAACCCAA

Downstream 100 bases:

>100_bases
GCGCGCGCCACATCTCCGACCTGCCCCCGGCGCTGCAAGCGAGGCTCCAGGGCCGTGATCTAATCGTTTTCGACGGCGAA
TGCGTGCTGTGTTCCGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MTGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTHQMIRADKCQSMDEASETALF
KAKMLIDQQGDSIFR

Sequences:

>Translated_95_residues
MTGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTHQMIRADKCQSMDEASETALF
KAKMLIDQQGDSIFR
>Mature_94_residues
TGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTHQMIRADKCQSMDEASETALFK
AKMLIDQQGDSIFR

Specific function: Unknown

COG id: COG5453

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10657; Mature: 10526

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTH
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCHHHH
QMIRADKCQSMDEASETALFKAKMLIDQQGDSIFR
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TGESPMSLLSKLFGSKPKPQAEPTLHNDYRIFPEPVQAQGGFQVQARIEKDVDGETKTH
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCHHHH
QMIRADKCQSMDEASETALFKAKMLIDQQGDSIFR
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA