Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yuxK [H]

Identifier: 89055946

GI number: 89055946

Start: 3502006

End: 3502464

Strand: Direct

Name: yuxK [H]

Synonym: Jann_3455

Alternate gene names: 89055946

Gene position: 3502006-3502464 (Clockwise)

Preceding gene: 89055945

Following gene: 89055947

Centisome position: 81.1

GC content: 63.18

Gene sequence:

>459_bases
GTGAGCGCGCGCCACATCTCCGACCTGCCCCCGGCGCTGCAAGCGAGGCTCCAGGGCCGTGATCTAATCGTTTTCGACGG
CGAATGCGTGCTGTGTTCCGCGTTCTTTCGCTTCATCGTGCGGATCGATACCGCCCACCGCTTCCACTTCGCCCATGCGC
AGTCGGATCTCGGGGCCGAGATCTACCGCGCCCTCGGCATGTCGGTCGATGATTTTGACACCAATCTCGTGATCATCGAC
GGCCTGATTCACGGGCGCCTCGATGCCTTCGCCGCCGCAATGTCGGCCGTGGGCTGGCCCCATAAGGGACTGGCCGCCGT
GCGGTTCATCCCCGAACCTCTGCGCAGCTTCCTGTACTATCGTATCGCAAGGAACCGCTATGCGATCTTCGGGCGCTATG
ATACCTGCATGATGCCCGACCCGCACCTGCGGGCACGGTTCATCGACGGGGTGCTGTGA

Upstream 100 bases:

>100_bases
TGATCCGCGCCGACAAATGCCAGTCCATGGACGAGGCGTCAGAGACCGCGCTGTTCAAGGCCAAGATGTTGATCGACCAA
CAGGGCGACAGCATTTTCCG

Downstream 100 bases:

>100_bases
TGCTTTATTCCCGCGCGCTGGGACATACGTTTTCCAATCTGCCCGAACCGTTGCAGGCGTTTCATTCAGTTGAGGACGCC
GTGTTCTACACCGGCCGTGT

Product: putative thiol-disulfide oxidoreductase DCC

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSARHISDLPPALQARLQGRDLIVFDGECVLCSAFFRFIVRIDTAHRFHFAHAQSDLGAEIYRALGMSVDDFDTNLVIID
GLIHGRLDAFAAAMSAVGWPHKGLAAVRFIPEPLRSFLYYRIARNRYAIFGRYDTCMMPDPHLRARFIDGVL

Sequences:

>Translated_152_residues
MSARHISDLPPALQARLQGRDLIVFDGECVLCSAFFRFIVRIDTAHRFHFAHAQSDLGAEIYRALGMSVDDFDTNLVIID
GLIHGRLDAFAAAMSAVGWPHKGLAAVRFIPEPLRSFLYYRIARNRYAIFGRYDTCMMPDPHLRARFIDGVL
>Mature_151_residues
SARHISDLPPALQARLQGRDLIVFDGECVLCSAFFRFIVRIDTAHRFHFAHAQSDLGAEIYRALGMSVDDFDTNLVIIDG
LIHGRLDAFAAAMSAVGWPHKGLAAVRFIPEPLRSFLYYRIARNRYAIFGRYDTCMMPDPHLRARFIDGVL

Specific function: Unknown

COG id: COG3011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007263 [H]

Pfam domain/function: PF04134 DUF393 [H]

EC number: NA

Molecular weight: Translated: 17197; Mature: 17066

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARHISDLPPALQARLQGRDLIVFDGECVLCSAFFRFIVRIDTAHRFHFAHAQSDLGAE
CCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCHHHEEEHHCCHHHHHH
IYRALGMSVDDFDTNLVIIDGLIHGRLDAFAAAMSAVGWPHKGLAAVRFIPEPLRSFLYY
HHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH
RIARNRYAIFGRYDTCMMPDPHLRARFIDGVL
HHHCCCEEEEECCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SARHISDLPPALQARLQGRDLIVFDGECVLCSAFFRFIVRIDTAHRFHFAHAQSDLGAE
CCCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCHHHEEEHHCCHHHHHH
IYRALGMSVDDFDTNLVIIDGLIHGRLDAFAAAMSAVGWPHKGLAAVRFIPEPLRSFLYY
HHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH
RIARNRYAIFGRYDTCMMPDPHLRARFIDGVL
HHHCCCEEEEECCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961491; 9274030; 9384377 [H]